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Protein Overview: ytr-PA, FBpp0309943

General Information:
Name(s) found: FBpp0309943 [FlyBase]
ytr-PA / FBpp0072143 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2R:complement(19735980..19736322,19738094..19738335); ID=FBpp0309943; name=ytr-PB; parent=FBgn0021895,FBtr0343278; dbxref=FlyBase:FBpp0309943,FlyBase_Annotation_IDs:CG18426-PB; MD5=c3380ea6f5d0c328c5aa8d0625aecec6; length=194; release=r5.56; species=Dmel; [FlyBase]
  • The gene yantar is referred to in FlyBase by the symbol Dmel\ytr (CG18426, FBgn0021895). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19734693..19738619. It has the cytological map location 60A3. It is reported to have molecular function</span>: mRNA binding. There is experimental evidence that it is involved in the biological process</span>: hemocyte differentiation. 11 alleles are reported. The phenotypes of these alleles are annotated with: lymph gland; hemocyte. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: precatalytic spliceosome [IDA]
    Biological Process: hemopoiesis [NAS]
    hemocyte differentiation [IMP][NAS]
    nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: mRNA binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSRSPASP AHRRREKERS ERKKRRERRS REREAIGVAP AGGSGSGGAG RRDRERDRDR  60
   61 SRSRDRERER ERDRARSRRS RSRSRVAGGG GGGGGGGSSG GNSSSGPSTS RRTTRNNAAA 120
  121 TAADRPKINE ADLEGKSPEE VEMLKTMGFC TFDTTKNRKV EGNDVGEVHV ILKRKYRQYM 180
  181 NRKGGFNRPL DFVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] Pfam 112.468521 No description for PF08648.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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