YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ytr-PA, FBpp0309943
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSRSPASP AHRRREKERS ERKKRRERRS REREAIGVAP AGGSGSGGAG RRDRERDRDR  60
   61 SRSRDRERER ERDRARSRRS RSRSRVAGGG GGGGGGGSSG GNSSSGPSTS RRTTRNNAAA 120
  121 TAADRPKINE ADLEGKSPEE VEMLKTMGFC TFDTTKNRKV EGNDVGEVHV ILKRKYRQYM 180
  181 NRKGGFNRPL DFVA

Type	Start	End	Confidence
Cytoplasmic	1	83	0.48
Transmembrane Helix	84	101	0.46
Non-Cytoplasmic	102	194	0.98