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Protein Overview: FBpp0309766, ppa-PA

General Information:
Name(s) found: FBpp0309766 [FlyBase]
ppa-PA / FBpp0071835 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • type=protein; loc=2R:complement(18574610..18576226); ID=FBpp0309766; name=ppa-PC; parent=FBgn0020257,FBtr0343014; dbxref=FlyBase:FBpp0309766,FlyBase_Annotation_IDs:CG9952-PC; MD5=6ddd68f42e3a22c7da54780f2c51af48; length=538; release=r5.56; species=Dmel; [FlyBase]
  • The gene partner of paired is referred to in FlyBase by the symbol Dmel\ppa (CG9952, FBgn0020257). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18573030..18576478. It has the cytological map location 59A1-59A2. Its molecular function is unknown. It is reported to be involved in the biological process</span>: ubiquitin-dependent protein catabolic process. 9 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: nuclear ubiquitin ligase complex [ISS]
    SCF ubiquitin ligase complex [NAS]
    Biological Process: ubiquitin-dependent protein catabolic process [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNTELLPF HHQTIAVLNN LNSHCGGSGS NGAATSGGAA IGGAGAGGAP SWAMDELYQQ  60
   61 TELPGLTRTG ATTTHHHLLR FTPYALHHRP PHHQLQTLPP ALYLQHAAAA AAAAAAAAAH 120
  121 AQHHHHHHHH LPHRPASPES PPPVEGTHIS NLFPELLEQI FEHLPVRDLG RAAQVCTAWR 180
  181 DAAYAKSVWK GVEAKLHLKR SSPSLFNCLV KRGIKKVQIL SLRRSLKDLV LGVPALTSLN 240
  241 LSGCFNVADM NLGHAFSVDL PNLKTLDLSL CKQITDTSLG RIAQHLRNLE TLELGGCCNI 300
  301 TNTGLLLIAW GLKKLKHLNL RSCWHISDQG IGHLAGFSRE TAEGNLQLEY LGLQDCQRLS 360
  361 DEALGHIAQG LTSLKSINLS FCVSVTDSGL KHLARMPKLE QLNLRSCDNI SDIGMAYLTE 420
  421 GGSGINSLDV SFCDKISDQA LTHIAQGLYR LRSLSLNQCQ ITDHGMLKIA KALHELENLN 480
  481 IGQCSRITDK GLQTLAEDLT NLKTIDLYGC TQLSSKGIDI IMKLPKLQKL NLGLWLVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..538] PSI-BLAST 14.522879 No description for 2z7xA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle