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View Structure Prediction Details

Protein: FBpp0309766, ppa-PA
Organism: Drosophila melanogaster
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309766, ppa-PA.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
275.0 [0..22] [537..61]

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Predicted Domain #1
Region A:
Residues: [1-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNTELLPF HHQTIAVLNN LNSHCGGSGS NGAATSGGAA IGGAGAGGAP SWAMDELYQQ  60
   61 TELPGLTRTG ATTTHHHLLR FTPYALHHRP PHHQLQTLPP ALYLQHAAAA AAAAAAAAAH 120
  121 AQHHHHHHHH LPHRPASPES PPPVEGTHIS NLFPELLEQI FEHLPVRDLG RAAQVCTAWR 180
  181 DAAYAKSVWK GVEAKLHLKR SSPSLFNCLV KRGIKKVQIL SLRRSLKDLV LGVPALTSLN 240
  241 LSGCFNVADM NLGHAFSVDL PNLKTLDLSL CKQITDTSLG RIAQHLRNLE TLELGGCCNI 300
  301 TNTGLLLIAW GLKKLKHLNL RSCWHISDQG IGHLAGFSRE TAEGNLQLEY LGLQDCQRLS 360
  361 DEALGHIAQG LTSLKSINLS FCVSVTDSGL KHLARMPKLE QLNLRSCDNI SDIGMAYLTE 420
  421 GGSGINSLDV SFCDKISDQA LTHIAQGLYR LRSLSLNQCQ ITDHGMLKIA KALHELENLN 480
  481 IGQCSRITDK GLQTLAEDLT NLKTIDLYGC TQLSSKGIDI IMKLPKLQKL NLGLWLVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.522879
Match: 2z7xA
Description: No description for 2z7xA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle