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Protein Overview: FBpp0309752, Rtf1-PA

General Information:
Name(s) found: FBpp0309752 [FlyBase]
Rtf1-PA / FBpp0071731 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:join(18262697..18262777,18262889..18263846,18263913..18265097,18265155..18265258); ID=FBpp0309752; name=Rtf1-PB; parent=FBgn0034722,FBtr0342988; dbxref=FlyBase:FBpp0309752,FlyBase_Annotation_IDs:CG10955-PB; MD5=79c1b5591af771db9120b2be4d5df4ca; length=775; release=r5.56; species=Dmel; [FlyBase]
  • The gene Rtf1 is referred to in FlyBase by the symbol Dmel\Rtf1 (CG10955, FBgn0034722). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18262597..18265352. It has the cytological map location 58D4. There is experimental evidence that it has the molecular function</span>: histone methyltransferase activity (H3-K4 specific). There is experimental evidence that it is involved in the biological process</span>: Notch signaling pathway; histone H3-K4 methylation; positive regulation of Notch signaling pathway; positive regulation of histone H3-K4 methylation. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 775 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: Notch signaling pathway [IMP]
    positive regulation of histone H3-K4 methylation [IMP]
    transcription initiation [IEA]
    positive regulation of Notch signaling pathway [IGI]
    histone H3-K4 methylation [IMP]
    Molecular Function: histone methyltransferase activity (H3-K4 specific) [IMP]
    DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRRTQSLI DSNSSDSDSE SETNLESDLM SLAKKRKKPQ TAAKSSSRSD SDSDWANNKA  60
   61 GAPSSKKKKR QKPSRDSSSS ESNWDDDSQD ERQPARQSPA QTQQEHKPPE QASQPAQLSE 120
  121 QEEGEVSDSD SDKSKSNSSS SGSDSSSSSS SSDSEFDDGF DDDLMGDDED RRRLNGLSEK 180
  181 ERETEIYKRI EQREIMRTRW EIERKLKLAR RGEKNQEKSK NKGERAKKKK EKREKKARKA 240
  241 REAQAPLPTQ ASTSTLLDVE PKPSNEVRSA SPLSTPALNR DAASTSAAVA SIMPDDAASS 300
  301 AGVSDYFDHK ERSKERKKNV EANKTDDKRS NAMALLKAKR EGKAKREEEE AKRMAEKDRD 360
  361 DDKEELDSVS GCKSAVKLKA SEIYSDDSGS SDWDEEEKPA GKRSRSNSSK ASSESEDEEK 420
  421 APQRPVFITT REDLNKLRLS RYKMERFVNL PIFESTVLNC FVRISIGNNG QKPVYRVAEI 480
  481 VGVVETGKIY SLGTTRTNRG LRLKHGTQER VFRLEFISNQ EFTENEFNKW NEVCQQSHVQ 540
  541 MPTIDLIAIK QNDIKKALNY EFKDEDVDKI VEEKNRFRNR PTNYAMKKTC LMKERDAAML 600
  601 RGDYDIAQDL GQQIDELENR ASELDKRRSH TLNLISYIND RNRKKNVEDA EKAILEEARA 660
  661 NKGLKISDPF TRRITQPRMG FKGAKKDEDD MQLAPLPPPP PGKKRPNEAG TSSASVRSTD 720
  721 SKDYSLYSLH DFDIDLDVPL PVNTNSVPKP ASKPAETVSK RSLNLEDYKK KRGLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 10.69897 Heavy meromyosin subfragment
    2 View Details [325..403] deduced N/A No confident structure predictions are available.
    3 View Details [404..522] PSI-BLAST 15.522879 No description for 2bzeA was found.
    4 View Details [523..685] PSI-BLAST 3.30103 No description for 2i1jA was found.
    5 View Details [686..775] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle