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Protein Overview: FBpp0311782, CG3...

General Information:
Name(s) found: FBpp0311782 [FlyBase]
CG30401-PA / FBpp0071647 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:complement(17873267..17873892,17873948..17874149); ID=FBpp0311782; name=CG30401-PC; parent=FBgn0050401,FBtr0345794; dbxref=FlyBase:FBpp0311782,FlyBase_Annotation_IDs:CG30401-PC; MD5=aa77cdf0c233b2ee177026362f012b1c; length=275; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30401 (CG30401, FBgn0050401). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:17873267..17874149. It has the cytological map location 58B1. It is reported to have molecular function</span>: DNA binding. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: chromosome, centromeric region [IEA]
    Biological Process: NONE FOUND
    Molecular Function: DNA binding [IEA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERFGIPRGK RPRVQVSLDD KERAIARIRG GETKAGISRE LGVPESTVRG WVKRAEQRLA  60
   61 RETTSQTGSA NYSTILAMTL AKPQVTISTK SSASSVISKS SYSSPPLDLK PLKQPQKRNI 120
  121 NGHPVTCTQD PVEDSAATSI PIPVPIPVPL PVPPMVSPDS EQQMSAWLHI FNAGILNFTL 180
  181 IASAAVLQAR SRGLADRLPL WQIITDFVDE AERNVNANGG WYLEGQPATG HMSARQRPVR 240
  241 VPTKVHSYRR NLKAPPAHIT AEDDEDSYTD ADVPH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] FFAS03 3.15 No description for 2jn6A was found.
    2 View Details [112..275] FFAS03 2.01 DNA-binding domain of retroviral integrase; Retroviral integrase, catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.232528774113254 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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