YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311782, CG3...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERFGIPRGK RPRVQVSLDD KERAIARIRG GETKAGISRE LGVPESTVRG WVKRAEQRLA  60
   61 RETTSQTGSA NYSTILAMTL AKPQVTISTK SSASSVISKS SYSSPPLDLK PLKQPQKRNI 120
  121 NGHPVTCTQD PVEDSAATSI PIPVPIPVPL PVPPMVSPDS EQQMSAWLHI FNAGILNFTL 180
  181 IASAAVLQAR SRGLADRLPL WQIITDFVDE AERNVNANGG WYLEGQPATG HMSARQRPVR 240
  241 VPTKVHSYRR NLKAPPAHIT AEDDEDSYTD ADVPH

Type	Start	End	Confidence
Non-Cytoplasmic	1	165	0.83
Transmembrane Helix	166	187	0.77
Cytoplasmic	188	275	0.66