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Protein Overview: king-tubby-PA

General Information:
Name(s) found: king-tubby-PA / FBpp0088556 [FlyBase]
Description(s) found:
Found 17 descriptions.
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  • The gene king tubby is referred to in FlyBase by the symbol Dmel\king-tubby (CG9398, FBgn0015721). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:16989435..17011220. It has the cytological map location 57B20-57C2. Its molecular function is unknown. It is reported to be involved in the biological process</span>: sensory perception of smell. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: sensory perception of smell [NAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAYIRQKRA SPGMVQASDL QINRPMSGMR SNSRELHAYD GPMQFISSPQ NPDQILTNGS  60
   61 PGGINPVAMN TSRNHSNNMR SLSTINQEAD LIEEISSHEL EDEESSPVTV IEQHQQSASH 120
  121 SANSTQSQKP RARQHSFSDN LDEDDYTNRN VAGAAPVRPA GMASSPYKDA TLDGSSNGTG 180
  181 NGTGGESEGD VIGNIDQFVM QPAPQGVLYK CRITRDRKGM DRGLFPIYYL HLERDYGKKI 240
  241 FLLGGRKRKK SKTSNYIVSC DPTDLSRNAD GFCGKLRSNV FGTSFTVFDN GNKESTESPR 300
  301 LDLAVIIYDT NILGFKGPRN MTVILPGMTE DDQRVKISSA DPKQQGILDL WKMKNMDNIV 360
  361 ELHNKTPVWN DETQSYVLNF HGRVTQASVK NFQLVHDSDP EYIVMQFGRT SEDVFTMDYR 420
  421 YPLCAMQAFA IALSSFDGKI ACE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 2.061986 View MSA. No confident structure predictions are available.
    2 View Details [115..443] PSI-BLAST 125.0 Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle