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Protein Overview: CG4038-PA

General Information:
Name(s) found: CG4038-PA / FBpp0071562 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG4038 (CG4038, FBgn0011824). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:16983447..16984808. It has the cytological map location 57B20. Based on sequence similarity, it is predicted to have molecular function</span>: snoRNA binding; rRNA pseudouridylation guide activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: rRNA pseudouridine synthesis; rRNA processing. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 237 amino acids

    Gene Ontology:
    Cellular Component: box H/ACA snoRNP complex [IEA]
    small nuclear ribonucleoprotein complex [ISS]
    small nucleolar ribonucleoprotein complex [ISS]
    Biological Process: rRNA pseudouridine synthesis [ISS]
    rRNA processing [ISS]
    Molecular Function: snoRNA binding [ISS]
    rRNA pseudouridylation guide activity [ISS]
    pseudouridine synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFGKPRGGG GGGGRGFGGG GGGGGRGFGG GGGGRGGGGG RGGGGGFGRG GGGRGGGRGA  60
   61 FDTGPPERVI PLGNYVYSCQ NDLVCKVDIQ DVPYFNAPIF LENKEQVGKI DEIFGTVRDY 120
  121 SVSIKLSDNV YANSFKPNQK LFIDPGKLLP IARFLPKPPQ PKGAKKAFTN NRGGGGGGGG 180
  181 FGGRGGGRGG GGRGGGGGRG GGGFRGGAGR NGGGGGGGGF NRGRGGGGGG GGGRGRW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..237] FFAS03 2.69 No description for 2hvyB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle