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Protein Overview: Or56a-PA

General Information:
Name(s) found: Or56a-PA / FBpp0085645 [FlyBase]
Description(s) found:
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  • gi|24655965|ref|NP_523796.2| odorant receptor 56a [Drosophila melanogaster] [NCBI NR]
  • gi|21626925|gb|AAF57517.2| odorant receptor 56a [Drosophila melanogaster] [NCBI NR]
  • gi|14285626|sp|Q9V8Y7.2|OR56A_DROME RecName: Full=Putative odorant receptor 56a [NCBI NR]
  • Odorant receptor 56a OS=Drosophila melanogaster GN=Or56a PE=1 SV=2 [Swiss-Prot]
  • (Q9V8Y7) Putative odorant receptor 56a [Swiss-Prot]
  • The gene Odorant receptor 56a is referred to in FlyBase by the symbol Dmel\Or56a (CG12501, FBgn0034473). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15656966..15658738. It has the cytological map location 56E2. Based on sequence similarity, it is predicted to have molecular function</span>: olfactory receptor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of smell. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12501-PA translation from_gene[CG12501 Or56a FBgn0034473] seq_release:3 mol_weight=48921 cds_boundaries:(2R:14,833,177..14,834,946[-]) aa_length:419 transcript_info:[CG12501-RA seq_release:3] gene_info:[gene symbol:Or56a FBgn0034473 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • CG12501-PA [Drosophila melanogaster]gi|24655965|ref|NP_523796.2| CG12501-PA [Drosophila melanogaster]gi|14285626|sp|Q9V8Y7|O56A_DROME Putative odorant receptor 56a [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(15656966..15657022,15657084..15657236,15657449..15657550,15657611..15657826,15657891..15658321,15658438..15658738); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotatio [fly-100309-contam.fasta]
  • Putative odorant receptor 56a [nr-271106-contam.fasta]
  • Odorant receptor 56a CG12501-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12501-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(15656966..15657022,15657084..15657236,15657449..15657550,15657611..15657826,15657891..15658321,15658438..15658738); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(15656966..15657022,15657084..15657236,15657449..15657550,15657611..15657826,15657891..15658321,15658438..15658738); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Putative odorant receptor 56a OS=Drosophila melanogaster GN=Or56a PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(15656966..15657022,15657084..15657236,15657449..15657550,15657611..15657826,15657891..15658321,15658438..15658738); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517,FlyMine:FBpp0085645,modMine:FBpp0085645; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(19770933..19771233,19770386..19770816,19770106..19770321,19769944..19770045,19769579..19769731,19769461..19769517)); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517,FlyMine:FBpp0085645,modMine:FBpp0085645; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(19770933..19771233,19770386..19770816,19770106..19770321,19769944..19770045,19769579..19769731,19769461..19769517)); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517,FlyMine:FBpp0085645,modMine:FBpp0085645; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0085645 type=protein; loc=2R:complement(join(19770933..19771233,19770386..19770816,19770106..19770321,19769944..19770045,19769579..19769731,19769461..19769517)); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517,FlyMine:FBpp0085645,modMine:FBpp0085645; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(19770933..19771233,19770386..19770816,19770106..19770321,19769944..19770045,19769579..19769731,19769461..19769517)); ID=FBpp0085645; name=Or56a-PA; parent=FBgn0034473,FBtr0086344; dbxref=FlyBase:FBpp0085645,FlyBase_Annotation_IDs:CG12501-PA,GB_protein:AAF57517.2,REFSEQ:NP_523796,GB_protein:AAF57517,UniProt/Swiss-Prot:Q9V8Y7,FlyMine:FBpp0085645,modMine:FBpp0085645; MD5=dd0bfa96bd13d55fe9d437bacf5077d2; length=419; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [ISS]
    Biological Process: sensory perception of smell [IEA][ISS]
    Molecular Function: odorant binding [IEA]
    olfactory receptor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKVKDLLLS PTTFEDPIFG THLRYFQWYG YVASKDQNRP LLSLIRCTIL TASIWLSCAL  60
   61 MLARVFRGYE NLNDGATSYA TAVQYFAVSI AMFNAYVQRD KVISLLRVAH SDIQNLMHEA 120
  121 DNREMELLVA TQAYTRTITL LIWIPSVIAG LMAYSDCIYR SLFLPKSVFN VPAVRRGEEH 180
  181 PILLFQLFPF GELCDNFVVG YLGPWYALGL GITAIPLWHT FITCLMKYVN LKLQILNKRV 240
  241 EEMDITRLNS KLVIGRLTAS ELTFWQMQLF KEFVKEQLRI RKFVQELQYL ICVPVMADFI 300
  301 IFSVLICFLF FALTVGVPSK MDYFFMFIYL FVMAGILWIY HWHATLIVEC HDELSLAYFS 360
  361 CGWYNFEMPL QKMLVFMMMH AQRPMKMRAL LVDLNLRTFI DIGRGAYSYF NLLRSSHLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] MSA 2.262995 View MSA. No confident structure predictions are available.
    2 View Details [98..257] MSA 2.300997 View MSA. No confident structure predictions are available.
    3 View Details [258..419] MSA 7.299994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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