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Protein Overview: mip40-PA

General Information:
Name(s) found: mip40-PA / FBpp0085744 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Myb-interacting protein 40 is referred to in FlyBase by the symbol Dmel\mip40 (CG15119, FBgn0034430). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15178610..15179708. It has the cytological map location 56C8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: oogenesis; negative regulation of transcription from RNA polymerase II promoter; spermatogenesis. 5 alleles are reported. The phenotype of these alleles is annotated with: testis. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: Myb complex [IDA]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IMP]
    eggshell chorion gene amplification [IC]
    oogenesis [IMP]
    spermatogenesis [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVPKKKET ALRLRESRRE EQKPETTNLP PDDDAESDLP IRGRPSKKLL IQQQQQRQYQ  60
   61 VKLDPKVKTV TSGSSEKPST SSSAAAAGAG GRIKARRVLY KKSVGAAAVA QKAPGETYVM 120
  121 RLFERSLDLS KYQDKTPLYP ICRAWMANQP KNPAVGAFQT DASLTATKRE DNGEEILSQI 180
  181 KSGEIKVINQ LPQAKSTDLP IIPPRLEFSQ EDKKREKALQ GASTSDLLSS NMNRWKKVRG 240
  241 HWIKHIKKYE KERYEVIDKI MSLVCKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] deduced N/A No confident structure predictions are available.
    2 View Details [136..267] MSA 2.004976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle