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Protein Overview: CG4966-PA

General Information:
Name(s) found: CG4966-PA / FBpp0086017 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG4966 (CG4966, FBgn0034261). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13571102..13578327. It has the cytological map location 54D5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: odorant binding; thymidylate synthase (FAD) activity; FAD binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport; dTMP biosynthetic process. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 858 amino acids

    Gene Ontology:
    Cellular Component: late endosome membrane [IDA]
    lysosomal membrane [IDA]
    Biological Process: dTMP biosynthetic process [IEA]
    miRNA loading onto RISC involved in gene silencing by miRNA [IMP]
    negative regulation of gene silencing by RNA [IMP]
    transport [IEA]
    siRNA loading onto RISC involved in chromatin silencing by small RNA [IMP]
    Molecular Function: odorant binding [IEA]
    FAD binding [IEA]
    thymidylate synthase (FAD) activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRDWRKTKH KRWQKVQQKQ QTSILTERET MIVFVYDTEC LTDEADDPIS AVLYFHPSWV  60
   61 SDSQKVALCG QLMGTSYFLK DCFFNPRILA LQNGKFVLKE FGRFILAIGT DRNIGDQLLE 120
  121 HRADLLSSLL KFFHRDVQTL YAQYAAPPAL NRRNLSEKLY HIFETYLPML QRNGNTFQNV 180
  181 PRLRMPKTAS HIFLEAIQTL QSCQQTKGIL GGAILYHNKV VASQLSDMVT KHLVLTDPLH 240
  241 IRTAAEQVTN HPEFHIPNGV QMLVVYLEHM QYRQLAGEAQ RAQNLQMNTA QLTQNGMPFQ 300
  301 YAKRKIKRDK SLIFTHIPEE EHAPEQQGAV EQLPPARPKS MRPTHLPLRI KSMQSKELPE 360
  361 SGIASINFDE TDSYPQFIGR TSVCNTPMTE NKVLPVANVM SICANPEDEG KEEDIHNSNG 420
  421 KTHSRRNSLK VDVEKFFQNF ISNPNKQLTR RKSSADLQDA LRAISKKLNN FTHGLKTDVN 480
  481 RNGSGNGDVS SDSPDFIEDD DKITSRTISD PTYPVFNTNG QQISRSLFQQ FLDQYRKLWG 540
  541 VASEQAHEDA ELAALVAEFQ EFNAEIQKLD EHMRQQAAEA SSADRNLNVS AAKTPLDKRS 600
  601 MTLPLKSAGE STFGERASGR SGAGGVPLTP LMAKLSVLAL SETTPIEIQT PLTTSKVFPR 660
  661 RSSLKCEDAV DALAALTTAP AQPPGPIQPD GLQRTELYIC GQQNMTLLLL MEEGTCQQQQ 720
  721 VVQKMFDICV AKFPHMESQL NQTLNVNVEG DNRDGSNYSF MCVDSKWDVL QRNGPWNPLE 780
  781 LNILESMHSI HSSGHHLTDL ILRSNDSVYY GHKNGRTEFF YKEPTHQING IPPPSDPIGN 840
  841 IQSRAKSRLE RDHSYMLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..224] MSA 1.014973 View MSA. No confident structure predictions are available.
    3 View Details [225..334] deduced N/A No confident structure predictions are available.
    4 View Details [335..539] deduced N/A No confident structure predictions are available.
    5 View Details [540..670] deduced N/A No confident structure predictions are available.
    6 View Details [671..858] MSA 2.011933 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle