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Protein Overview: l(2)k01209-PC, l...

General Information:
Name(s) found: l(2)k01209-PD / FBpp0086071 [FlyBase]
l(2)k01209-PC / FBpp0086070 [FlyBase]
l(2)k01209-PB / FBpp0086069 [FlyBase]
Description(s) found:
Found 47 descriptions.
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  • The gene lethal (2) k01209 is referred to in FlyBase by the symbol Dmel\l(2)k01209 (CG4798, FBgn0022029). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13307938..13313192. It has the cytological map location 54B7. Based on sequence similarity, it is predicted to have molecular function</span>: uridine kinase activity. The biological processes in which it is involved are not known. 14 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • The gene lethal (2) k01209 is referred to in FlyBase by the symbol Dmel\l(2)k01209 (CG4798, FBgn0022029). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13307938..13313192. It has the cytological map location 54B7. Based on sequence similarity, it is predicted to have molecular function</span>: uridine kinase activity. The biological processes in which it is involved are not known. 14 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • The gene lethal (2) k01209 is referred to in FlyBase by the symbol Dmel\l(2)k01209 (CG4798, FBgn0022029). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13307938..13313192. It has the cytological map location 54B7. Based on sequence similarity, it is predicted to have molecular function</span>: uridine kinase activity. The biological processes in which it is involved are not known. 14 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 626 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: ATP binding [IEA]
    uridine kinase activity [ISS]
    phosphotransferase activity, alcohol group as acceptor [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSITFLCSK SGHNTNNNSI NSSNNDVPKG AKANSAFAAA SAGLLTIANH QQQQLLQQPH  60
   61 QQQQQQQQQH HQQSKVKAIA AKTNGHIDDR SLSDVTEQLY VDPYADLSNG LPGDLNCCPA 120
  121 SPTTVPAKAS LDSPLKRSGR RQRTTSIGNQ TTTANPSECI IRANNRTIYT AGRPPWYNCA 180
  181 GQQVEPFVIG ICGGSASGKT TVAEKIIESL DVPWVTLLSM DCFYKILNEK QHEQALINEY 240
  241 NFDHPDAFDI ELLLDVLTKL KEGRKVEVPV YNFVTHGRES QTKTMYGANV IIFEGILTFH 300
  301 SPEVLKLLDM KIFVDTDPDI RLARRLRRDI SQRGRDLKGV LKQYLNMVKP SYCNYIAPTM 360
  361 AHADIIVPRG GDNKVAIHLI VQHVHTQLQL RGFKLRETLA NSYKDQPMPH SLHLLHPTPQ 420
  421 IKGLHTFIRC RNTSRDEFIF YSKRLIRLVI EYALSLFPFK KTTVETPQGV LYEGKRMESR 480
  481 KICGVSILRA GETMEQAVCD VCKDIRIGKI LIQTNLKTGE PELYYLRLPK DIKDYKVILM 540
  541 DATVATGAAA MMAIRVLLDH DVPEDNIILA SLLMAEIGVH SIAYAFPKVK IVTSALDPEI 600
  601 NSKFYVIPGI GNFGDRYFGT EPSDEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] deduced N/A No confident structure predictions are available.
    2 View Details [184..407] PSI-BLAST 42.522879 No description for 2jeoA was found.
    3 View Details [408..626] PSI-BLAST 49.69897 Uracil PRTase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • uracil phosphoribosyltransferase activity
    		•  3.97944228585882 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.91023158228049 bayes_pls_golite062009
  • adenine phosphoribosyltransferase activity
    		•  3.07502596276449 bayes_pls_golite062009
  • hypoxanthine phosphoribosyltransferase activity
    		•  2.97347277288245 bayes_pls_golite062009
  • transferase activity
    		•  2.73727660668741 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.53679639481311 bayes_pls_golite062009
  • catalytic activity
    		•  2.30431811394775 bayes_pls_golite062009
  • nucleobase binding
    		•  1.70525606708275 bayes_pls_golite062009
  • purine binding
    		•  1.24786927434743 bayes_pls_golite062009
  • ribose phosphate diphosphokinase activity
    		•  0.947697983706416 bayes_pls_golite062009
  • binding
    		•  0.847513071499147 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  0.749909396904601 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.552133387792911 bayes_pls_golite062009
  • DNA binding
    		•  0.439741935655503 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.396538943915776 bayes_pls_golite062009
  • amidophosphoribosyltransferase activity
    		•  0.360901350940423 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.148898393751978 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle