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Protein Overview: FBpp0308985, Tan...

General Information:
Name(s) found: FBpp0308985 [FlyBase]
Tango7-PA / FBpp0086705 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=2R:complement(10050703..10051641,10051696..10051875,10051992..10052036); ID=FBpp0308985; name=Tango7-PB; parent=FBgn0033902,FBtr0339964; dbxref=FlyBase:FBpp0308985,FlyBase_Annotation_IDs:CG8309-PB; MD5=70f5e58e540f3dd516e760c35ced9adc; length=387; release=r5.56; species=Dmel; [FlyBase]
  • The gene Transport and Golgi organization 7 is referred to in FlyBase by the symbol Dmel\Tango7 (CG8309, FBgn0033902). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10050571..10052374. It has the cytological map location 50E1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: catalytic activity. There is experimental evidence that it is involved in the biological process</span>: Golgi organization. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Golgi apparatus [IDA]
    Biological Process: Golgi organization [IMP]
    Molecular Function: catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSHPVFIDL SLDEQVQELR KYFKKLGAEI SSEKSNKGVE DDLHKIIGVC DVCFKDGEPS  60
   61 QIDGILNSIV SIMITIPLDR GENIVLAYCE KMTKAPNLPL GKVCLQSLWR LFNNLDTASP 120
  121 LRYHVYYHLV QVAKQCEQVL EVFSGVDQLK SQFANCPPSS EQMQKLYRLL HDVTKDTNLE 180
  181 LSSKVMIELL GTYTADNACV AREDAMKCIV TALADPNTFL LDPLLSLKPV RFLEGDLIHD 240
  241 LLSIFVSEKL PAYVQFYEDH REFVNSQGLN HEQNMKKMRL LTFMQLAESS PEMTFETLTK 300
  301 ELQINEDEVE PFVIEVLKTK LVRARLDQAN QKVHISSTMH RTFGAPQWEQ LRDLLQAWKE 360
  361 NLSTVREGLT SVSSAQLDLA RSQKLIH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] deduced N/A No confident structure predictions are available.
    2 View Details [77..220] PSI-BLAST 4.69897 Designed protein cTPR3
    3 View Details [221..387] PSI-BLAST 10.221849 Solution structure of the PCI domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.95153041057228 bayes_pls_golite062009
  • DNA binding
    		•  2.31496579551752 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.93897246216986 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.83610835165707 bayes_pls_golite062009
  • transcription factor activity
    		•  1.75197559197272 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.04956049764478 bayes_pls_golite062009
  • protein binding
    		•  0.776629952382685 bayes_pls_golite062009
  • transcription activator activity
    		•  0.57320482892428 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.363241395353229 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.12259689863474 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle