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Protein Overview: CG6209-PA

General Information:
Name(s) found: CG6209-PA / FBpp0086777 [FlyBase]
Description(s) found:
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  • gi|7303284|gb|AAF58345.1| CG6209 [Drosophila melanogaster] [NCBI NR]
  • gi|24653446|ref|NP_610894.1| CG6209 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG6209 (CG6209, FBgn0033862). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9549000..9551103. It has the cytological map location 50B9. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6209-PA translation from_gene[CG6209 CG6209 FBgn0033862] seq_release:3 mol_weight=69024 cds_boundaries:(2R:8,726,392..8,728,212[-]) aa_length:607 transcript_info:[CG6209-RA seq_release:3] gene_info:[gene symbol:CG6209 FBgn0033862 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V6S7) CG6209 protein [DrosMelano7227.FASTAC.txt]
  • (AE003817) CG6209 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6209-PA [Drosophila melanogaster]gi|24653446|ref|NP_610894.1| CG6209-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(9549180..9551003); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345; MD5=d31143d1556da896 [fly-100309-contam.fasta]
  • CG6209-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(9549180..9551003); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(9549180..9551003); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG6209 OS=Drosophila melanogaster GN=CG6209 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(9549180..9551003); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345,FlyMine:FBpp0086777,modMine:FBpp0086777; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(13661675..13663498); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345,FlyMine:FBpp0086777,modMine:FBpp0086777; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(13661675..13663498); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345,FlyMine:FBpp0086777,modMine:FBpp0086777; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG6209 OS=Drosophila melanogaster GN=CG6209 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0086777 type=protein; loc=2R:complement(13661675..13663498); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345,FlyMine:FBpp0086777,modMine:FBpp0086777; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(13661675..13663498); ID=FBpp0086777; name=CG6209-PA; parent=FBgn0033862,FBtr0087651; dbxref=FlyBase:FBpp0086777,FlyBase_Annotation_IDs:CG6209-PA,GB_protein:AAF58345.1,REFSEQ:NP_610894,GB_protein:AAF58345,UniProt/TrEMBL:A1Z9G6,FlyMine:FBpp0086777,modMine:FBpp0086777; MD5=d31143d1556da896a50c0aa261cafc45; length=607; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLGRHLSR SLAYHLKQPS WNRLFLKPRT NLHHVSVYLG QPRILSHKSD AYDDLSSKYR  60
   61 MKTNCMINQA IDQSEPQKFY YHHRIYKASQ LKDRVFKRNI DQICLNQQRS FCKEADKDSC 120
  121 YCKKLEDENC ALQPLPKPEP KKKCSRISRK RKHLLEQKKK AAKSEAPPES QSEPNLDEAV 180
  181 DELKFSCMLA SEKKDCERKQ YKALCEELRK SKPQGDPKSV DSLVKCMLSG IQKACIVHAE 240
  241 KIVYQKKFAE QIAIEEAKRK EREKKEGKPL DCTKPSEDDE TGAKNKAEKK KAKEKAEIKR 300
  301 LLKEIKGKCK KQREEAERKK KEEAELNKKC KEAAAKKKCE ELEAKKKCEE AAAKKKCEEA 360
  361 AAKKKCEEAA AKKKCEEAAA KKKCEEAAAK KKCEEAAAKK KCEEAAAKKK CEEAAAKKKC 420
  421 EKSAPKNKCQ ESAAKNKCKE AAAKKNCAEA EAKKKCEEAA AKKKCEEAAA KKKCEEAAAK 480
  481 KKCEEAAAKK KCEEGAAKKK CEEKAEIKKC VESDRKKNSA NDAAMKKCEE DKKKKSQEAE 540
  541 KKTKSEQAAL QKKCAEAKKN KAREAEKKKK TAESERKKDC DLAEFKKRCN ELKKKIAEAN 600
  601 CEEKKGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..366] PSI-BLAST 19.30103 Heavy meromyosin subfragment
    2 View Details [367..607] FFAS03 1.23 BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle