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Protein Overview: CG3814-PA, FBpp0...

General Information:
Name(s) found: FBpp0305107 [FlyBase]
CG3814-PA / FBpp0086927 [FlyBase]
Description(s) found:
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  • gi|7303389|gb|AAF58447.1| CG3814, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|51092047|gb|AAT94437.1| RE58310p [Drosophila melanogaster] [NCBI NR]
  • gi|19922136|ref|NP_610824.1| CG3814, isoform A [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=REFSEQ:NP_001260928,GB_protein:AGB93461,FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3814 (CG3814, FBgn0025692). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8762663..8764471. It has the cytological map location 49D6. Based on sequence similarity, it is predicted to have molecular function</span>: N-methyl-D-aspartate selective glutamate receptor activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG3814-PA translation from_gene[CG3814 BEST:CK02213 FBgn0025692] seq_release:3 mol_weight=26654 cds_boundaries:(2R:7,939,990..7,941,003[-]) aa_length:239 transcript_info:[CG3814-RA seq_release:3] gene_info:[gene symbol:BEST:CK02213 FBgn0025692 gene_bo [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V6H6) CG3814 protein [DrosMelano7227.FASTAC.txt]
  • (AE003820) CG3814 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG3814-PA, isoform A [Drosophila melanogaster]gi|51092047|gb|AAT94437.1| RE58310p [Drosophila melanogaster]gi|19922136|ref|NP_610824.1| CG3814-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ: [fly-100309-contam.fasta]
  • CG3814-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE58310p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3814, isoform A OS=Drosophila melanogaster GN=BEST:CK02213 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447,FlyMine:FBpp0086927,modMine:FBpp0086927; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(8762778..8763284,8763347..8763448,8763606..8763688,8763767..8763794); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447,FlyMine:FBpp0086927,modMine:FBpp0086927; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=REFSEQ:NP_001260928,GB_protein:AGB93461,FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447,FlyMine:FBpp0086927,modMine:FBpp0086927; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=REFSEQ:NP_001260928,GB_protein:AGB93461,FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8T8W2, CG3814, isoform A OS=Drosophila melanogaster GN=BEST:CK02213 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0086927 type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447,FlyMine:FBpp0086927,modMine:FBpp0086927; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305107 type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=REFSEQ:NP_001260928,GB_protein:AGB93461,FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0086927; name=CG3814-PA; parent=FBgn0025692,FBtr0087814; dbxref=FlyBase:FBpp0086927,FlyBase_Annotation_IDs:CG3814-PA,GB_protein:AAF58447.1,REFSEQ:NP_610824,GB_protein:AAF58447,UniProt/TrEMBL:Q6AWP0,FlyMine:FBpp0086927,modMine:FBpp0086927; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(12876262..12876289,12876101..12876183,12875842..12875943,12875273..12875779)); ID=FBpp0305107; name=CG3814-PD; parent=FBgn0025692,FBtr0332885; dbxref=REFSEQ:NP_001260928,GB_protein:AGB93461,FlyBase:FBpp0305107,FlyBase_Annotation_IDs:CG3814-PD,UniProt/TrEMBL:Q6AWP0; MD5=275999c6b1053e2c3db03d7432300fe4; length=239; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: N-methyl-D-aspartate selective glutamate receptor complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: N-methyl-D-aspartate selective glutamate receptor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDNHFQYD AEADKSFAFD DQSIRKGFIR KVYLILMCQL LITFGFVSVF TFSKASQEWV  60
   61 QKNPALFWIA LAVLIVTMIC MACCESVRRK TPLNFIFLFL FTVAESFLLG MVAGQFEADE 120
  121 VLMAVGITAA VALGLTLFAL QTKYDFTMCG GVLVACLVVF IIFGIIAIFI PGKVIGLVYA 180
  181 SLGALLFSVY LVYDTQLMLG GNHKYSISPE EYIFAALNLY LDIINIFMYI LTIIGLSRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] MSA 5.316996 View MSA. No confident structure predictions are available.
    2 View Details [116..239] MSA 18.325993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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