YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG3814-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDNHFQYD AEADKSFAFD DQSIRKGFIR KVYLILMCQL LITFGFVSVF TFSKASQEWV  60
   61 QKNPALFWIA LAVLIVTMIC MACCESVRRK TPLNFIFLFL FTVAESFLLG MVAGQFEADE 120
  121 VLMAVGITAA VALGLTLFAL QTKYDFTMCG GVLVACLVVF IIFGIIAIFI PGKVIGLVYA 180
  181 SLGALLFSVY LVYDTQLMLG GNHKYSISPE EYIFAALNLY LDIINIFMYI LTIIGLSRN

Type	Start	End	Confidence
Cytoplasmic	1	31	0.99
Transmembrane Helix	32	53	0.93
Non-Cytoplasmic	54	64	0.88
Transmembrane Helix	65	84	0.96
Cytoplasmic	85	92	0.85
Transmembrane Helix	93	114	0.92
Non-Cytoplasmic	115	120	0.87
Transmembrane Helix	121	140	0.95
Cytoplasmic	141	148	0.78
Transmembrane Helix	149	170	0.93
Non-Cytoplasmic	171	174	0.85
Transmembrane Helix	175	193	0.90
Cytoplasmic	194	213	0.80
Transmembrane Helix	214	236	0.88
Non-Cytoplasmic	237	239	0.85