Protein Overview: prom-PB

General Information:
Name(s) found:	prom-PB / FBpp0288976 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|221468641\|ref\|NP_001137753.1\| prominin, isoform B [Drosophila melanogaster] [NCBI NR] gi\|220902374\|gb\|ACL83206.1\| prominin, isoform B [Drosophila melanogaster] [NCBI NR] gi\|116875733\|gb\|ABK30916.1\| IP13255p [Drosophila melanogaster] [NCBI NR] The gene prominin is referred to in FlyBase by the symbol Dmel\prom (CG42310, FBgn0259210). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20302931..20315910. It has the cytological map location 60C8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: rhabdomere development. 12 alleles are reported. The phenotypes of these alleles are annotated with: rhabdomere; tergite; ommatidium. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase] type=protein; loc=2R:complement(20303094..20303196,20303418..20303483,20303705..20303788,20304645..20304860,20304954..20305382,20306144..20306397,20306508..20306799,20307827..20308352,20308864..20309020,20309391..20309602,20310432..20310527,20310707..2031 [fly-100309-contam.fasta] IP13255p [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=2R:complement(20303094..20303196,20303418..20303483,20303705..20303788,20304645..20304860,20304954..20305382,20306144..20306397,20306508..20306799,20307827..20308352,20308864..20309020,20309391..20309602,20310432..20310527,20310707..20310894,20310965..20311197,20311257..20311312,20313208..20313496); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=2R:complement(20303094..20303196,20303418..20303483,20303705..20303788,20304645..20304860,20304954..20305382,20306144..20306397,20306508..20306799,20307827..20308352,20308864..20309020,20309391..20309602,20310432..20310527,20310707..20310894,20310965..20311197,20311257..20311312,20313208..20313496); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] IP13255p OS=Drosophila melanogaster GN=prom PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=2R:complement(20303094..20303196,20303418..20303483,20303705..20303788,20304645..20304860,20304954..20305382,20306144..20306397,20306508..20306799,20307827..20308352,20308864..20309020,20309391..20309602,20310432..20310527,20310707..20310894,20310965..20311197,20311257..20311312,20313208..20313496); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206,FlyMine:FBpp0288976,modMine:FBpp0288976; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=2R:complement(join(24425685..24425973,24423734..24423789,24423442..24423674,24423184..24423371,24422909..24423004,24421868..24422079,24421341..24421497,24420304..24420829,24418985..24419276,24418621..24418874,24417431..24417859,24417122..24417337,24416182..24416265,24415895..24415960,24415571..24415673)); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206,FlyMine:FBpp0288976,modMine:FBpp0288976; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=2R:complement(join(24425685..24425973,24423734..24423789,24423442..24423674,24423184..24423371,24422909..24423004,24421868..24422079,24421341..24421497,24420304..24420829,24418985..24419276,24418621..24418874,24417431..24417859,24417122..24417337,24416182..24416265,24415895..24415960,24415571..24415673)); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206,FlyMine:FBpp0288976,modMine:FBpp0288976; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of B7YZQ3, IP13255p OS=Drosophila melanogaster GN=prom PE=1 SV=1 [DROME.fasta.20160308] FBpp0288976 type=protein; loc=2R:complement(join(24425685..24425973,24423734..24423789,24423442..24423674,24423184..24423371,24422909..24423004,24421868..24422079,24421341..24421497,24420304..24420829,24418985..24419276,24418621..24418874,24417431..24417859,24417122..24417337,24416182..24416265,24415895..24415960,24415571..24415673)); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206,FlyMine:FBpp0288976,modMine:FBpp0288976; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=2R:complement(join(24425685..24425973,24423734..24423789,24423442..24423674,24423184..24423371,24422909..24423004,24421868..24422079,24421341..24421497,24420304..24420829,24418985..24419276,24418621..24418874,24417431..24417859,24417122..24417337,24416182..24416265,24415895..24415960,24415571..24415673)); ID=FBpp0288976; name=prom-PB; parent=FBgn0259210,FBtr0299698; dbxref=FlyBase:FBpp0288976,FlyBase_Annotation_IDs:CG42310-PB,REFSEQ:NP_001137753,GB_protein:ACL83206,UniProt/TrEMBL:A0AVW1,FlyMine:FBpp0288976,modMine:FBpp0288976; MD5=87d3788dbe871c92bedaf1d43ca18cde; length=1066; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	1066 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	rhabdomere development [IMP]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQRNLTLPT PAATTIMSSS SAAMSAGFAS LGGPTTSALT GSTIALATTT TTAPPTTTPA  60
   61 TFFTYSIPGM DIAPGPFIFT YVSEFLSLIT PEELPLDSIR DVLHKNTSLL DFASNAIKIE 120
  121 SGFIALMSVF AILALVPLIA TCAWCCGRRS TQEEVDHIRN APCHIRDESL EESLRCRKSA 180
  181 GLVTLWVVFI LLTLSDFSIF YANSRLSAGI EMTPEMVKSA VHDVEVFLKD THLQIKQKLD 240
  241 NGFHVSVERV VKDLEDVDVL LGEPIQAEIS AHTGLELAYD SLTTLSLANA ELIYRVLMLQ 300
  301 ETVGRALKLS QEAAARMEEL QIQLSVLQRQ CTYRDRPLCD TLRIRSFEEN GVVDALKTLQ 360
  361 EDQSIFRMRY LGEIEFGATV KNLTSEVGVS RSIFSNFPQQ VKHDTAYERN YTLEQLASIR 420
  421 HRTTANAQQL TSTVNGLLRR LEDTWSSLQP AYNELKEWAD AYWSVGWIAG TVIVWVMLFM 480
  481 LMSYCCFLCE SNAKSGVVFF IAVMLICLAS ICLTIFGVFS LAVGGNAEVF VCRSLYDEDY 540
  541 NMLGKLLDKP GYAYAREPQT GIIGELLRPV GVNRSVVNVG LGQALRGCEQ NQASYNVFQL 600
  601 DAFVNTSKIA DLRQFPKVST AIDAISVSGR TLLSLTQSVQ NILDNMLQTS SFNLTTYRSS 660
  661 VGAPTPEKDL ATFIDQMQRV ALQIQDVATS SRMTTLGSRS KRLQASILQP LENLQNEILY 720
  721 HLTALELQRD PWAKQVNQTL NHLKSIQSYL ENKAGEICHN MTRDYRDRLK AYLTTSKATM 780
  781 ESQLGDTTTK CRPFYDTFDA SRTFLCRNMV DFINGLTFFI FLTLLLWAIG TPVGLNLITV 840
  841 QTRLNVMQAA QARSKGRHRR SDRSPEHEQR SGSRGRKKQR TSSSATSGRS GKRDQSRERS 900
  901 TSSTARPKPP LRRTATEETL DLADEESTPS RQQQQQPPPQ RRQESDRERV RERDQRSRER 960
  961 ELSRGRDASA MNTPVRSRSR QQLQRTGTDE FDLDDSDAYG AGGHLDADVA AARRTPPRGA1020
 1021 PPPPPPPAAG LNSDRTVRWN EDETEDFDFE EVDAPKSPMY LSHNLQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: prom-PB

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: