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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: prom-PB
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQRNLTLPT PAATTIMSSS SAAMSAGFAS LGGPTTSALT GSTIALATTT TTAPPTTTPA  60
   61 TFFTYSIPGM DIAPGPFIFT YVSEFLSLIT PEELPLDSIR DVLHKNTSLL DFASNAIKIE 120
  121 SGFIALMSVF AILALVPLIA TCAWCCGRRS TQEEVDHIRN APCHIRDESL EESLRCRKSA 180
  181 GLVTLWVVFI LLTLSDFSIF YANSRLSAGI EMTPEMVKSA VHDVEVFLKD THLQIKQKLD 240
  241 NGFHVSVERV VKDLEDVDVL LGEPIQAEIS AHTGLELAYD SLTTLSLANA ELIYRVLMLQ 300
  301 ETVGRALKLS QEAAARMEEL QIQLSVLQRQ CTYRDRPLCD TLRIRSFEEN GVVDALKTLQ 360
  361 EDQSIFRMRY LGEIEFGATV KNLTSEVGVS RSIFSNFPQQ VKHDTAYERN YTLEQLASIR 420
  421 HRTTANAQQL TSTVNGLLRR LEDTWSSLQP AYNELKEWAD AYWSVGWIAG TVIVWVMLFM 480
  481 LMSYCCFLCE SNAKSGVVFF IAVMLICLAS ICLTIFGVFS LAVGGNAEVF VCRSLYDEDY 540
  541 NMLGKLLDKP GYAYAREPQT GIIGELLRPV GVNRSVVNVG LGQALRGCEQ NQASYNVFQL 600
  601 DAFVNTSKIA DLRQFPKVST AIDAISVSGR TLLSLTQSVQ NILDNMLQTS SFNLTTYRSS 660
  661 VGAPTPEKDL ATFIDQMQRV ALQIQDVATS SRMTTLGSRS KRLQASILQP LENLQNEILY 720
  721 HLTALELQRD PWAKQVNQTL NHLKSIQSYL ENKAGEICHN MTRDYRDRLK AYLTTSKATM 780
  781 ESQLGDTTTK CRPFYDTFDA SRTFLCRNMV DFINGLTFFI FLTLLLWAIG TPVGLNLITV 840
  841 QTRLNVMQAA QARSKGRHRR SDRSPEHEQR SGSRGRKKQR TSSSATSGRS GKRDQSRERS 900
  901 TSSTARPKPP LRRTATEETL DLADEESTPS RQQQQQPPPQ RRQESDRERV RERDQRSRER 960
  961 ELSRGRDASA MNTPVRSRSR QQLQRTGTDE FDLDDSDAYG AGGHLDADVA AARRTPPRGA1020
 1021 PPPPPPPAAG LNSDRTVRWN EDETEDFDFE EVDAPKSPMY LSHNLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle