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Protein Overview: FBpp0308696, CG8...

General Information:
Name(s) found: FBpp0308696 [FlyBase]
CG8525-PA / FBpp0087038 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2R:join(8313216..8313267,8313321..8313904,8313967..8314374); ID=FBpp0308696; name=CG8525-PB; parent=FBgn0033735,FBtr0339634; dbxref=FlyBase:FBpp0308696,FlyBase_Annotation_IDs:CG8525-PB; MD5=ee4f53d42e9168c6470ca0d26d3f276a; length=347; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8525 (CG8525, FBgn0033735). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8312963..8314486. It has the cytological map location 49A4. Based on sequence similarity, it is predicted to have molecular function</span>: deoxyribose-phosphate aldolase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: deoxyribonucleotide catabolic process. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: deoxyribonucleotide catabolic process [IEA]
    Molecular Function: deoxyribose-phosphate aldolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSMDVKELE VNKTLPYDPS LLKVNISLRQ VEEIALTVSQ RCHVTGANEI AWALRALMLT  60
   61 DLTTLAGDDT AANVRRLCLR ACYPFEPQFF DKFFDRALIP EMHTAAVCVY PARVKDAYLA 120
  121 IQQYDKLDKV AIAAVATGFP TGQYGLQTRL QEISHAILAG ATEIDIVINR QLALVGDWEA 180
  181 MYNEVVLMRS ACGQRAHLKT ILAIGELGTM DNVYKAAMVC MMAGADFIKT STGKETVNAT 240
  241 LPVGLVMIFA IQEFKRRTCQ IVGLKPAGGV KTVRDAIAWM TLVNETLGIR WLRPERFRFG 300
  301 ASGLLDDIER VVRQGVKKLE EDEAQKNVPV SREAAAAETF CKELRKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] PSI-BLAST 35.39794 Deoxyribose-phosphate aldolase DeoC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • deoxyribose-phosphate aldolase activity
    		•  2.53712494800381 bayes_pls_golite062009
  • transaldolase activity
    		•  0.657551083859431 bayes_pls_golite062009
  • lyase activity
    		•  0.437176828950096 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.41660515357045 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.270307871677629 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle