YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Sln-PA

General Information:
Name(s) found: Sln-PA / FBpp0087139 [FlyBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • The gene Silnoon is referred to in FlyBase by the symbol Dmel\Sln (CG8271, FBgn0033657). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:7732831..7739829. It has the cytological map location 48C4-48C5. There is experimental evidence that it has the molecular function</span>: monocarboxylic acid transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transmembrane transport. 7 alleles are reported. The phenotype of these alleles is annotated with: dorsal mesothoracic disc. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 855 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transmembrane transport [IEA]
    Molecular Function: secondary active monocarboxylate transmembrane transporter activity [ISS]
    monocarboxylic acid transmembrane transporter activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLQRDWHL QGSRGSVYCA SEPDPTGGVQ YESGGCLLHT KTAEGSGGGA GVDGSGGGVG  60
   61 LECGSLFSVV SAPPAPLPDI VVPTEMDGKH MESAAFRSGC CSPNASPMRR PATLSLDTQC 120
  121 CPRTLHASLL EHQISELEED DNENLLTVSS ITARPLIAKS HELRSSRKSG SGSGSGLNTA 180
  181 RSRCVRRAKE RERDRVTVAR RSKQVVKDRD SSTTTTESGG PNVEPPDGGY GWFIVFGAFS 240
  241 VQFWVAGLVK SYGVLYVEIM ETFPSSTATV ASWIPAILSA LCLVLAPLSS ALCQRFSCRT 300
  301 VVFVGGIFCA MGMILSYFAT SLLHLLLTFG VLTGIGGGLS TTPGIVIVSQ YFDKHRALAN 360
  361 GICVSGTAAG SFILPVLIKH LAENCGFHGT ILILGGCMLH VCVSATLYRP ISAYTDQDSG 420
  421 QGQEETAKPL NEDINPSTTG ILTTSTYLDT CDVGAGHELS DKFIEHLFLE ESKNHLNYYA 480
  481 SKQPAQDKSA QESDDEVKDI IGETTFIKPM KKVRSSGLLH SVEDLSTDST WVYRKHSGTD 540
  541 SNRGSRRRRN VFANDEVISK IQAHLEKPLS PPSVVSRGLS KSMEIPTPVS NLSDLKQQPV 600
  601 EQAELGILDS QLVESIIDGD GHLAADEDDD DDEERGPRTC CERIEMYLDI SLLQDPSFIL 660
  661 MCLSVTLMSV GCPYMLYYLP AHVISIGYNK SEAGYLVAIS AVLDLIGRLG LGWLCDLQLF 720
  721 DRKKTYTLCI LGAGCAVLTI PFAKTLVLVG LSAAVYGLCL GSWYVLMPVL LADVFGTDRI 780
  781 SSSYGLVRMF QSIGAISVPP LAGLMRDLSG DYEICFYCMG SCMVLGTTPL IVWSILEARN 840
  841 HRLFVQREEE ECEEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] deduced N/A No confident structure predictions are available.
    2 View Details [226..529] PSI-BLAST 22.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    3 View Details [530..602] deduced N/A No confident structure predictions are available.
    4 View Details [603..855] FFAS03 3.46 No description for 2v8nA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle