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Protein Overview: psq-PG, psq-PH, ...

General Information:
Name(s) found: psq-PH / FBpp0087374 [FlyBase]
psq-PG / FBpp0087373 [FlyBase]
psq-PF / FBpp0087372 [FlyBase]
psq-PD / FBpp0087371 [FlyBase]
psq-PE / FBpp0087370 [FlyBase]
Description(s) found:
Found 71 descriptions.
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  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
  • The gene pipsqueak is referred to in FlyBase by the symbol Dmel\psq (CG2368, FBgn0004399). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6445409..6503753. It has the cytological map location 47A13-47B1. It is reported to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: olfactory behavior; imaginal disc-derived wing morphogenesis. 79 alleles are reported. The phenotypes of these alleles are annotated with 25 unique terms, many of which group under: embryonic abdomen; embryonic segment; organ system; embryonic tagma; peripheral nervous system; female germline cyst; external compound sense organ; adult segment; nervous system; adult mesothoracic segment. It has 12 annotated transcripts and 12 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 645 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: gene silencing [TAS]
    imaginal disc-derived wing morphogenesis [IMP]
    pole plasm assembly [NAS]
    olfactory behavior [IMP]
    Molecular Function: DNA binding [IEA][NAS][TAS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLGMGMNG GLLGVPMGFL DFTPEPPAPS ATPVTVTEHV DLSCNPSTDT RDLSNTTEPL  60
   61 DIDNHLAQQI HRLDQSPMHS ISHHHTGDES NSNLVQHIKS EVIEAKHLAA QHHALSQAQQ 120
  121 QHAHHQAHQQ HQQHQQQQHQ QQQQHLHAQQ LLAQSQLQQQ QQQQQQQQQH HQQQQQQAAA 180
  181 AAAAAGVHGQ HGGHVTHADI GGATVMEIDP SQIKHEPGMI ITPEIVNMMS SGHMDMYNSD 240
  241 TSEDSMMIAN GSPHDQKEPH YTNLDQQHGL GGSVCGPGPG GAGGGGGMSG GAGSGSGEKG 300
  301 QFNGPKAWTQ DDMNSALDAL KNQNMSLTKA SAIYGIPSTT LWQRAHRMGI ETPKKEGGTK 360
  361 SWNEDALQNA LEALRSGQIS ANKASKAFGI PSSTLYKIAR REGIRLAAPF NAAPTTWTPE 420
  421 DLERALEAIR AGNTSVQKAS AEFGIPTGTL YGRCKREGIE LSRSNPTPWS EDAMNEALNS 480
  481 VRVGQMSINQ AAIHYNLPYS SLYGRFKRGK YDVVANTSGV ALLNTSGNTT GSIEIIEHSQ 540
  541 ENSLHMLQQQ FPYSPSPHPP TPQHHSTPQH HSSAQQGPPT PQHMQQHVVH MQQQQQQQQQ 600
  601 QSPHPGHHPQ HMQQDVVTSS SQVVHSQQQQ QLQQIYQHHG TPERS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] FFAS03 0.989 BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2
    2 View Details [301..466] FFAS03 1.02 Paired protein (prd)
    3 View Details [467..645] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.232528774113254 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle