| Protein: | psq-PG, psq-PH, ... |
| Organism: | Drosophila melanogaster |
| Length: | 645 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for psq-PG, psq-PH, ....
| Description | E-value | Query Range |
Subject Range |
|
|
876.0 | [0..1] | [642..420] |
|
Region A: Residues: [1-300] |
1 11 21 31 41 51
| | | | | |
1 MTSLGMGMNG GLLGVPMGFL DFTPEPPAPS ATPVTVTEHV DLSCNPSTDT RDLSNTTEPL 60
61 DIDNHLAQQI HRLDQSPMHS ISHHHTGDES NSNLVQHIKS EVIEAKHLAA QHHALSQAQQ 120
121 QHAHHQAHQQ HQQHQQQQHQ QQQQHLHAQQ LLAQSQLQQQ QQQQQQQQQH HQQQQQQAAA 180
181 AAAAAGVHGQ HGGHVTHADI GGATVMEIDP SQIKHEPGMI ITPEIVNMMS SGHMDMYNSD 240
241 TSEDSMMIAN GSPHDQKEPH YTNLDQQHGL GGSVCGPGPG GAGGGGGMSG GAGSGSGEKG 300
301
|
| Detection Method: |  |
| Confidence: | 0.989 |
| Match: | 1miuA |
| Description: | BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [301-466] |
1 11 21 31 41 51
| | | | | |
1 QFNGPKAWTQ DDMNSALDAL KNQNMSLTKA SAIYGIPSTT LWQRAHRMGI ETPKKEGGTK 60
61 SWNEDALQNA LEALRSGQIS ANKASKAFGI PSSTLYKIAR REGIRLAAPF NAAPTTWTPE 120
121 DLERALEAIR AGNTSVQKAS AEFGIPTGTL YGRCKREGIE LSRSNP
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 1pdnC |
| Description: | Paired protein (prd) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.232528774113254 | bayes_pls_golite062009 |
|
Region A: Residues: [467-645] |
1 11 21 31 41 51
| | | | | |
1 TPWSEDAMNE ALNSVRVGQM SINQAAIHYN LPYSSLYGRF KRGKYDVVAN TSGVALLNTS 60
61 GNTTGSIEII EHSQENSLHM LQQQFPYSPS PHPPTPQHHS TPQHHSSAQQ GPPTPQHMQQ 120
121 HVVHMQQQQQ QQQQQSPHPG HHPQHMQQDV VTSSSQVVHS QQQQQLQQIY QHHGTPERS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
