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Protein Overview: CG12913-PA, FBpp...

General Information:
Name(s) found: FBpp0308536 [FlyBase]
CG12913-PA / FBpp0087424 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:join(6140492..6141530,6141645..6141781,6141842..6142144,6142206..6142349); ID=FBpp0308536; name=CG12913-PB; parent=FBgn0033500,FBtr0339450; dbxref=FlyBase:FBpp0308536,FlyBase_Annotation_IDs:CG12913-PB; MD5=0bbcdcb2c6de52c7a6fb324fb9127b61; length=540; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG12913 (CG12913, FBgn0033500). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6136761..6142349. It has the cytological map location 46F8-46F9. It is reported to have molecular function</span>: acetylgalactosaminyltransferase activity. It is reported to be involved in the biological process</span>: chondroitin sulfate biosynthetic process. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: Golgi cisterna membrane [IEA]
    Biological Process: chondroitin sulfate biosynthetic process [NAS]
    Molecular Function: transferase activity, transferring hexosyl groups [IEA]
    acetylgalactosaminyltransferase activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNSLVTKLL LRLLLLFALL TGASIVVLTK CGFDELTTRE TQANNPSESS GFSYTLSERE  60
   61 AEIERLKQEV LALRTQILFL QNNRSTAKPS NGSLQLQETT AGPPTAPLGH HYDCSSYIRK 120
  121 QVGAAEILHG LPLNNEYELI PYNHFTFTRV YPIDLGLGKR VVEKPIGYRR RDLIEAVNKA 180
  181 LESLNRNHSA RIRAKGAGSA AAYASDVIKY TLDDFIEGIY RNEPTTGTQY ELYFQSVKHQ 240
  241 ASPVRRALVM RPFAPLQTVQ LSELSSSVDN SGAPPSHSPP IIHVILPLAG RLHSFRGFLQ 300
  301 MFAKLEDRRL ELIVVYFGTS GLEQARSLAG RSQRTQFLAL NETFSRAKAL RLGAEHIQPA 360
  361 EEDVLLFMCD VDIMFTTKFL ERCRWNAAPG KKVYYPVVFS LYNPHVVYSL QGKPLPSEEE 420
  421 QLVISRDTGF WRDFGYGMTC QYRSNFLKVR GFDEEEIVGW GGEDVMLYRK YVRSKIKIIR 480
  481 ATDPGIFHRW HTKICSSSLT ADQYRACIRS RALNEASHAQ LGFLAFRDDI AAANAAKMTS 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] MSA 2.082968 View MSA. No confident structure predictions are available.
    2 View Details [253..540] PSI-BLAST 8.69897 beta-1,4-galactosyltransferase mutant Met344His (M344H-Gal-T1) complex with UDP-galactose and manganese


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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