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View Structure Prediction Details

Protein: CG12913-PA, FBpp...
Organism: Drosophila melanogaster
Length: 540 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12913-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|109504038 - gi|109504038|ref|XP_001070610.1| PREDICTED: similar to Chondroitin beta-1,4-N-acetylgalactosaminyltr...
396.0 [0..10] [538..10]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNSLVTKLL LRLLLLFALL TGASIVVLTK CGFDELTTRE TQANNPSESS GFSYTLSERE  60
   61 AEIERLKQEV LALRTQILFL QNNRSTAKPS NGSLQLQETT AGPPTAPLGH HYDCSSYIRK 120
  121 QVGAAEILHG LPLNNEYELI PYNHFTFTRV YPIDLGLGKR VVEKPIGYRR RDLIEAVNKA 180
  181 LESLNRNHSA RIRAKGAGSA AAYASDVIKY TLDDFIEGIY RNEPTTGTQY ELYFQSVKHQ 240
  241 ASPVRRALVM RP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-540]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FAPLQTVQLS ELSSSVDNSG APPSHSPPII HVILPLAGRL HSFRGFLQMF AKLEDRRLEL  60
   61 IVVYFGTSGL EQARSLAGRS QRTQFLALNE TFSRAKALRL GAEHIQPAEE DVLLFMCDVD 120
  121 IMFTTKFLER CRWNAAPGKK VYYPVVFSLY NPHVVYSLQG KPLPSEEEQL VISRDTGFWR 180
  181 DFGYGMTCQY RSNFLKVRGF DEEEIVGWGG EDVMLYRKYV RSKIKIIRAT DPGIFHRWHT 240
  241 KICSSSLTAD QYRACIRSRA LNEASHAQLG FLAFRDDIAA ANAAKMTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1tvyA
Description: beta-1,4-galactosyltransferase mutant Met344His (M344H-Gal-T1) complex with UDP-galactose and manganese
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle