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Protein Overview: CG1407-PB

General Information:
Name(s) found: CG1407-PB / FBpp0087521 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1407 (CG1407, FBgn0033474). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5915948..5920393. It has the cytological map location 46D5-46D7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNDDHRRRK TPCGFCMAVF KWIPVLFITA VIAWSYYAYV VELCIRNSEN RIGMIFMLLF  60
   61 YHLFLTLFMW SYWRTIMTSV GRIPDQWRIP DEEVSRLFRA DSPDTQKRIL NNFARDLPVT 120
  121 NRTMNGSVRF CEKCKIIKPD RAHHCSVCSC CVLKMDHHCP WVNNCVNFYN YKYFVLFLGY 180
  181 ALVYCLYVAF TSLHDFVEFW KVGAGQLNAS GMGRFHILFL FFIAIMFAIS LVSLFGYHIY 240
  241 LVLVNRTTLE SFRAPIFRVG GPDKNGYNLG RYANFCEVFG DDWQYWFLPV FSSFGDGKTF 300
  301 PIRHMEEDTE SLLGYHSDTR IELEEDFLPE PRFQDSIP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] FFAS03 1.04 Effector domain of rabphilin-3a
    2 View Details [212..338] MSA 8.537996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • histone acetyltransferase activity
    		•  2.27787208911046 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  2.27787208911046 bayes_pls_golite062009
  • binding
    		•  2.21365807674155 bayes_pls_golite062009
  • transporter activity
    		•  1.33264421804057 bayes_pls_golite062009
  • protein binding
    		•  1.22943142958169 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.19034196920111 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.14293461071656 bayes_pls_golite062009
  • phospholipid binding
    		•  1.09010543599677 bayes_pls_golite062009
  • DNA binding
    		•  1.01821892002729 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.868529388780493 bayes_pls_golite062009
  • hydrolase activity
    		•  0.697325409224408 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.674982339943257 bayes_pls_golite062009
  • protein transporter activity
    		•  0.583047726565019 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.565596821175093 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  0.514633973697725 bayes_pls_golite062009
  • histone binding
    		•  0.440372329067948 bayes_pls_golite062009
    		• 0.308979985902751 bayes_pls_golite062009
  • phosphatidylinositol binding
    		•  0.251953910109229 bayes_pls_golite062009
  • transcription factor activity
    		•  0.204306775436268 bayes_pls_golite062009
  • ligase activity
    		•  0.161281682592326 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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