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Protein Overview: CG1688-PA

General Information:
Name(s) found: CG1688-PA / FBpp0087579 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1688 (CG1688, FBgn0027589). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5653867..5694370. It has the cytological map location 46B2-46B4. Based on sequence similarity, it is predicted to have molecular function</span>: potassium channel activity. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 918 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: potassium channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVEQAIKA KQPQPSQLDC SIDDETDATE FGGLGGVGGA GCGSEMGAKT TASLTAKPRS  60
   61 SLRRCCGHLL KLLFSTPGLV LLVIGYSVLG GLLFPLLEAP QDISKSAAIA KSREDCLREL 120
  121 WIITEKLNVL YERNWTMLVH EQLRRFEGSI VAATRQGSAG SSGGGGAGLF HEGSASALGH 180
  181 FGYDAGDSQS WSFSEALLYS VTVITTIGHG SLTPRTAAGK LATIFYALVG VPLMLMCLSS 240
  241 LGALLADGLQ CTYVRLCCQL QRHQEHRRKS TPGTSTPSAS SAANSREKDT DKRSKRRMAN 300
  301 CKGCQYDAAN SETSLNDCLE YGQKGKLPPD KKEGDACQLL RNLNPQQHFY QQQQQQPQQP 360
  361 DVMLMTTTSG SALLKYAPQQ QQLQQQQQLS TATLPRQHHQ MQLQQQQQQL QQNFVAVPSS 420
  421 MLRMPLTVPP NCYAPATATI YFPFGHAPSA PGSPAHNQAH PTQNPNGNAL GNTTLGSQPL 480
  481 VKYHTIHLQP ASGKHRVLAS GLQDATAVNL VTASEASTST LEAITLPPPP AYQTASVHAV 540
  541 RRAKFVAKPL PQEINALMDC GTGSPDLSGR HDLLPPPHSG SPATGTAASP LLTYTAAATS 600
  601 PQLSAGIKGG SGPAPTAGAP MLVSGAGRGA AALTDNGFMA AGVCGMGAAA APLPVTSMGA 660
  661 ATTTASSAAS TLSALLSANS TGNVDIMEDE DEQERERLSN CPHGTPSRVP LIASPLSVPQ 720
  721 DSGENTTRNT AFNRHTLQPL SRKTLLLTRR CHRHASGTLY DSTANNTETS DDEEYMQHGS 780
  781 EQFVLKKLRY HCDGKDCREA EDSEEEDEKA DGRQVPISLV LLILASYICV GTVIFALWEN 840
  841 WSLVDGAYFC FVTLSTIGYG DFVPARSFNG PELQLYACCA YLLLGLVLVA MSFSILETQL 900
  901 MWKCKRIAVR LKLARADG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 63.045757 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [272..330] PSI-BLAST 8.0 Intermediate gating structure 1 of the inwardly rectifying K+ channel KirBac3.1
    3 View Details [331..498] PSI-BLAST 3.39794 Sec24
    4 View Details [499..602] deduced N/A No confident structure predictions are available.
    5 View Details [603..763] MSA 3.286996 View MSA. No confident structure predictions are available.
    6 View Details [764..918] PSI-BLAST 12.522879 No description for 2q67A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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