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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG1688-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVEQAIKA KQPQPSQLDC SIDDETDATE FGGLGGVGGA GCGSEMGAKT TASLTAKPRS  60
   61 SLRRCCGHLL KLLFSTPGLV LLVIGYSVLG GLLFPLLEAP QDISKSAAIA KSREDCLREL 120
  121 WIITEKLNVL YERNWTMLVH EQLRRFEGSI VAATRQGSAG SSGGGGAGLF HEGSASALGH 180
  181 FGYDAGDSQS WSFSEALLYS VTVITTIGHG SLTPRTAAGK LATIFYALVG VPLMLMCLSS 240
  241 LGALLADGLQ CTYVRLCCQL QRHQEHRRKS TPGTSTPSAS SAANSREKDT DKRSKRRMAN 300
  301 CKGCQYDAAN SETSLNDCLE YGQKGKLPPD KKEGDACQLL RNLNPQQHFY QQQQQQPQQP 360
  361 DVMLMTTTSG SALLKYAPQQ QQLQQQQQLS TATLPRQHHQ MQLQQQQQQL QQNFVAVPSS 420
  421 MLRMPLTVPP NCYAPATATI YFPFGHAPSA PGSPAHNQAH PTQNPNGNAL GNTTLGSQPL 480
  481 VKYHTIHLQP ASGKHRVLAS GLQDATAVNL VTASEASTST LEAITLPPPP AYQTASVHAV 540
  541 RRAKFVAKPL PQEINALMDC GTGSPDLSGR HDLLPPPHSG SPATGTAASP LLTYTAAATS 600
  601 PQLSAGIKGG SGPAPTAGAP MLVSGAGRGA AALTDNGFMA AGVCGMGAAA APLPVTSMGA 660
  661 ATTTASSAAS TLSALLSANS TGNVDIMEDE DEQERERLSN CPHGTPSRVP LIASPLSVPQ 720
  721 DSGENTTRNT AFNRHTLQPL SRKTLLLTRR CHRHASGTLY DSTANNTETS DDEEYMQHGS 780
  781 EQFVLKKLRY HCDGKDCREA EDSEEEDEKA DGRQVPISLV LLILASYICV GTVIFALWEN 840
  841 WSLVDGAYFC FVTLSTIGYG DFVPARSFNG PELQLYACCA YLLLGLVLVA MSFSILETQL 900
  901 MWKCKRIAVR LKLARADG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle