| Protein: | CG1688-PA |
| Organism: | Drosophila melanogaster |
| Length: | 918 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1688-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
333.0 | [0..23] | [732..222] |
|
Region A: Residues: [1-271] |
1 11 21 31 41 51
| | | | | |
1 MSDVEQAIKA KQPQPSQLDC SIDDETDATE FGGLGGVGGA GCGSEMGAKT TASLTAKPRS 60
61 SLRRCCGHLL KLLFSTPGLV LLVIGYSVLG GLLFPLLEAP QDISKSAAIA KSREDCLREL 120
121 WIITEKLNVL YERNWTMLVH EQLRRFEGSI VAATRQGSAG SSGGGGAGLF HEGSASALGH 180
181 FGYDAGDSQS WSFSEALLYS VTVITTIGHG SLTPRTAAGK LATIFYALVG VPLMLMCLSS 240
241 LGALLADGLQ CTYVRLCCQL QRHQEHRRKS T
|
| Detection Method: |  |
| Confidence: | 63.045757 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [272-330] |
1 11 21 31 41 51
| | | | | |
1 PGTSTPSASS AANSREKDTD KRSKRRMANC KGCQYDAANS ETSLNDCLEY GQKGKLPPD
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1xl4A |
| Description: | Intermediate gating structure 1 of the inwardly rectifying K+ channel KirBac3.1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [331-498] |
1 11 21 31 41 51
| | | | | |
1 KKEGDACQLL RNLNPQQHFY QQQQQQPQQP DVMLMTTTSG SALLKYAPQQ QQLQQQQQLS 60
61 TATLPRQHHQ MQLQQQQQQL QQNFVAVPSS MLRMPLTVPP NCYAPATATI YFPFGHAPSA 120
121 PGSPAHNQAH PTQNPNGNAL GNTTLGSQPL VKYHTIHLQP ASGKHRVL
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [499-602] |
1 11 21 31 41 51
| | | | | |
1 ASGLQDATAV NLVTASEAST STLEAITLPP PPAYQTASVH AVRRAKFVAK PLPQEINALM 60
61 DCGTGSPDLS GRHDLLPPPH SGSPATGTAA SPLLTYTAAA TSPQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [603-763] |
1 11 21 31 41 51
| | | | | |
1 LSAGIKGGSG PAPTAGAPML VSGAGRGAAA LTDNGFMAAG VCGMGAAAAP LPVTSMGAAT 60
61 TTASSAASTL SALLSANSTG NVDIMEDEDE QERERLSNCP HGTPSRVPLI ASPLSVPQDS 120
121 GENTTRNTAF NRHTLQPLSR KTLLLTRRCH RHASGTLYDS T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [764-918] |
1 11 21 31 41 51
| | | | | |
1 ANNTETSDDE EYMQHGSEQF VLKKLRYHCD GKDCREAEDS EEEDEKADGR QVPISLVLLI 60
61 LASYICVGTV IFALWENWSL VDGAYFCFVT LSTIGYGDFV PARSFNGPEL QLYACCAYLL 120
121 LGLVLVAMSF SILETQLMWK CKRIAVRLKL ARADG
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 2q67A |
| Description: | No description for 2q67A was found. |
