Protein: | CG1688-PA |
Organism: | Drosophila melanogaster |
Length: | 918 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1688-PA.
Description | E-value | Query Range |
Subject Range |
|
333.0 | [0..23] | [732..222] |
Region A: Residues: [1-271] |
1 11 21 31 41 51 | | | | | | 1 MSDVEQAIKA KQPQPSQLDC SIDDETDATE FGGLGGVGGA GCGSEMGAKT TASLTAKPRS 60 61 SLRRCCGHLL KLLFSTPGLV LLVIGYSVLG GLLFPLLEAP QDISKSAAIA KSREDCLREL 120 121 WIITEKLNVL YERNWTMLVH EQLRRFEGSI VAATRQGSAG SSGGGGAGLF HEGSASALGH 180 181 FGYDAGDSQS WSFSEALLYS VTVITTIGHG SLTPRTAAGK LATIFYALVG VPLMLMCLSS 240 241 LGALLADGLQ CTYVRLCCQL QRHQEHRRKS T |
Detection Method: | |
Confidence: | 63.045757 |
Match: | 2a79B |
Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [272-330] |
1 11 21 31 41 51 | | | | | | 1 PGTSTPSASS AANSREKDTD KRSKRRMANC KGCQYDAANS ETSLNDCLEY GQKGKLPPD |
Detection Method: | |
Confidence: | 8.0 |
Match: | 1xl4A |
Description: | Intermediate gating structure 1 of the inwardly rectifying K+ channel KirBac3.1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [331-498] |
1 11 21 31 41 51 | | | | | | 1 KKEGDACQLL RNLNPQQHFY QQQQQQPQQP DVMLMTTTSG SALLKYAPQQ QQLQQQQQLS 60 61 TATLPRQHHQ MQLQQQQQQL QQNFVAVPSS MLRMPLTVPP NCYAPATATI YFPFGHAPSA 120 121 PGSPAHNQAH PTQNPNGNAL GNTTLGSQPL VKYHTIHLQP ASGKHRVL |
Detection Method: | |
Confidence: | 3.39794 |
Match: | 1m2vB |
Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [499-602] |
1 11 21 31 41 51 | | | | | | 1 ASGLQDATAV NLVTASEAST STLEAITLPP PPAYQTASVH AVRRAKFVAK PLPQEINALM 60 61 DCGTGSPDLS GRHDLLPPPH SGSPATGTAA SPLLTYTAAA TSPQ |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [603-763] |
1 11 21 31 41 51 | | | | | | 1 LSAGIKGGSG PAPTAGAPML VSGAGRGAAA LTDNGFMAAG VCGMGAAAAP LPVTSMGAAT 60 61 TTASSAASTL SALLSANSTG NVDIMEDEDE QERERLSNCP HGTPSRVPLI ASPLSVPQDS 120 121 GENTTRNTAF NRHTLQPLSR KTLLLTRRCH RHASGTLYDS T |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [764-918] |
1 11 21 31 41 51 | | | | | | 1 ANNTETSDDE EYMQHGSEQF VLKKLRYHCD GKDCREAEDS EEEDEKADGR QVPISLVLLI 60 61 LASYICVGTV IFALWENWSL VDGAYFCFVT LSTIGYGDFV PARSFNGPEL QLYACCAYLL 120 121 LGLVLVAMSF SILETQLMWK CKRIAVRLKL ARADG |
Detection Method: | |
Confidence: | 12.522879 |
Match: | 2q67A |
Description: | No description for 2q67A was found. |