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Protein Overview: CG12042-PA

General Information:
Name(s) found: CG12042-PA / FBpp0088018 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG12042 (CG12042, FBgn0033206). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3554746..3556534. It has the cytological map location 43E9. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: microtubule-based movement. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 514 amino acids

    Gene Ontology:
    Cellular Component: dynactin complex [ISS]
    Biological Process: microtubule-based movement [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMQPSPVK YACSCGILNP INTLFFCRHC PKLRCGFCVT HEIESHFCSN CLENIPSTEA  60
   61 RHKKNCCANC FDCPCCQHTL SARASTVPVV RKSEEAKEPK DGDSKGEATP PVPASSKPSA 120
  121 VPTTKKMYYL SCLSCRWTTR DVGIPDQGVA TGTWPDNECL YQARFNALVE YFQAVVLQEK 180
  181 QEKLEFMRRK APKQHKFPSL TDRTGLTVSL IRRQIGWNDK APKAKAVITP AEATAEVEGL 240
  241 PENIFTEPLN LRNVTTITQR HSQPADQPTA VGSLYPQRRS LWIKRSLRCR QCEHNLIKPE 300
  301 YHPTSIKYRI QHFASYHVPE VVMVRCEQPL VAGKSNAILL KLTNPTIYDM TIRLLTASPP 360
  361 EDPQLSTEAT RVAKEEPISS SPLLKAVGIT LSRQNSTREV KRDVIDISNA EIVPLESEFV 420
  421 LNQRDDSKEF DEDVQLSTEE PKFIVWRKGN KVLLRLQFTP AEELSGLADV VLGFYMQYTY 480
  481 VNTVNNAQEK REPTTHVLHS RVFITAGATE QKAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] FFAS03 1.76 Cellular receptor HveA
    2 View Details [249..328] deduced N/A No confident structure predictions are available.
    3 View Details [329..514] MSA 1.028953 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.76717431895702 bayes_pls_golite062009
  • protein binding
    		•  2.07200994492609 bayes_pls_golite062009
  • receptor activity
    		•  1.11188157443817 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.339110612474249 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle