| Protein: | CG12042-PA |
| Organism: | Drosophila melanogaster |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12042-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
698.0 | [0..1] | [511..1] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MSFMQPSPVK YACSCGILNP INTLFFCRHC PKLRCGFCVT HEIESHFCSN CLENIPSTEA 60
61 RHKKNCCANC FDCPCCQHTL SARASTVPVV RKSEEAKEPK DGDSKGEATP PVPASSKPSA 120
121 VPTTKKMYYL SCLSCRWTTR DVGIPDQGVA TGTWPDNECL YQARFNALVE YFQAVVLQEK 180
181 QEKLEFMRRK APKQHKFPSL TDRTGLTVSL IRRQIGWNDK APKAKAVITP AEATAEVEGL 240
241 PENIFTEP
|
| Detection Method: |  |
| Confidence: | 1.76 |
| Match: | 1jmaB |
| Description: | Cellular receptor HveA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.76717431895702 | bayes_pls_golite062009 |
| protein binding | 2.07200994492609 | bayes_pls_golite062009 |
| receptor activity | 1.11188157443817 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.339110612474249 | bayes_pls_golite062009 |
|
Region A: Residues: [249-328] |
1 11 21 31 41 51
| | | | | |
1 LNLRNVTTIT QRHSQPADQP TAVGSLYPQR RSLWIKRSLR CRQCEHNLIK PEYHPTSIKY 60
61 RIQHFASYHV PEVVMVRCEQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [329-514] |
1 11 21 31 41 51
| | | | | |
1 PLVAGKSNAI LLKLTNPTIY DMTIRLLTAS PPEDPQLSTE ATRVAKEEPI SSSPLLKAVG 60
61 ITLSRQNSTR EVKRDVIDIS NAEIVPLESE FVLNQRDDSK EFDEDVQLST EEPKFIVWRK 120
121 GNKVLLRLQF TPAEELSGLA DVVLGFYMQY TYVNTVNNAQ EKREPTTHVL HSRVFITAGA 180
181 TEQKAN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
