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Protein Overview: FBpp0297784, FBp...

General Information:
Name(s) found: FBpp0297788 [FlyBase]
FBpp0297784 [FlyBase]
Description(s) found:
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  • gi|28573289|ref|NP_724586.2| CG30492, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|28573287|ref|NP_724587.2| CG30492, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28381087|gb|AAF59221.3| CG30492, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28381086|gb|AAF59220.5| CG30492, isoform A [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30492 (CG30492, FBgn0050492). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3510749..3539292. It has the cytological map location 43E5-43E7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior. 6 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • >CG30492-PA translation from_gene[CG30492 CG30492 FBgn0050492] seq_release:3 mol_weight=107272 cds_boundaries:(2R:2,691,093..2,712,287[+]) aa_length:983 transcript_info:[CG30492-RA seq_release:3] gene_info:[gene symbol:CG30492 synonyms:[CG17983 CG17984 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG30492-PB translation from_gene[CG30492 CG30492 FBgn0050492] seq_release:3 mol_weight=107272 cds_boundaries:(2R:2,691,093..2,712,287[+]) aa_length:983 transcript_info:[CG30492-RB seq_release:3] gene_info:[gene symbol:CG30492 synonyms:[CG17983 CG17984 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V4P6) CG30492-PA (CG30492-PB) [DrosMelano7227.FASTAC.txt]
  • CG30492-PB, isoform B [Drosophila melanogaster]gi|28381086|gb|AAF59220.5| CG30492-PA, isoform A [Drosophila melanogaster]gi|28573287|ref|NP_724587.2| CG30492-PB [Drosophila melanogaster]gi|28573289|ref|NP_724586.2| CG30492-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774. [fly-100309-contam.fasta]
  • CG30492-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG30492-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087988; name=CG30492-PA; parent=FBgn0050492,FBtr0088914; dbxref=FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,GB_protein:AAF59220.5,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087987; name=CG30492-PB; parent=FBgn0050492,FBtr0088913; dbxref=FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,GB_protein:AAF59221.3,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087988; name=CG30492-PA; parent=FBgn0050492,FBtr0088914; dbxref=FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,GB_protein:AAF59220.5,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0087987; name=CG30492-PB; parent=FBgn0050492,FBtr0088913; dbxref=FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,GB_protein:AAF59221.3,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG30492, isoform A OS=Drosophila melanogaster GN=CG30492 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(3517697..3517833,3521721..3521819,3522264..3522505,3522559..3522705,3526103..3526410,3527209..3527376,3527436..3527556,3527622..3528122,3535802..3536015,3536088..3536202,3537816..3538313,3538367..3538507,3538574..3538713,3538774..3538894); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4K7U0, CG43340, isoform A OS=Drosophila melanogaster GN=CG43340 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0297784 type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0297788 type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297784; name=CG43340-PA; parent=FBgn0263077,FBtr0306931; dbxref=FlyBase:FBpp0297784,FlyBase:FBpp0087988,FlyBase_Annotation_IDs:CG30492-PA,FlyBase_Annotation_IDs:CG43340-PA,REFSEQ:NP_724586,GB_protein:AAF59220,UniProt/TrEMBL:A1Z720; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:join(7630192..7630328,7634216..7634314,7634759..7635000,7635054..7635200,7638598..7638905,7639704..7639871,7639931..7640051,7640117..7640617,7648297..7648510,7648583..7648697,7650311..7650808,7650862..7651002,7651069..7651208,7651269..7651389); ID=FBpp0297788; name=CG43340-PF; parent=FBgn0263077,FBtr0306935; dbxref=FlyBase:FBpp0297788,FlyBase:FBpp0087987,FlyBase_Annotation_IDs:CG30492-PB,FlyBase_Annotation_IDs:CG43340-PF,REFSEQ:NP_724587,GB_protein:AAF59221,UniProt/TrEMBL:A1Z720; MD5=7db6454a0498d2cb5c3411d03a89cbf3; length=983; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 983 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: inter-male aggressive behavior [IMP]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPYICLMEL PINRPGSGNL LLGLTSVVGL IGGAYLLQCG AQQLLGKLAN KKWRKEESSS  60
   61 EDHACNVCCA DLDLSSAKNY VTCCTCEKSV CRGPKCADWR PKDAKWECQL CQSSKESLAH 120
  121 TSSWVAEQMS FNQHKFVYPM RARSEVYIPI VGDGNDSSMQ FESVSQIGQN AHMDERAKIR 180
  181 EYVEEIVAEM LGGNLDHVKV GQLSKSENYL PAIVNGHTNN SNNNNNNNHA DSELADLSQT 240
  241 RLRSLIETII AETLRSSTLS ASGAVSEISL DTRSHVSDLA NGNGLKRRHR TEHYFEPKIY 300
  301 QDLLATAVLN KIVDKEGNTR LAAESTPDLS GRHIDENFNA EALSTTSGSS IEPRSDCSLT 360
  361 DHEIGLDNGK SQSLQTDLER ESVLSDYIAA HMVPLPDFSA SVTESEDDIG SISSGMIGDG 420
  421 NWEDNWLFKK KRSSATPSSI GMLVPAPREN VRAQIGDKTT DEVSDLSEIG SDIEESSLDL 480
  481 LRCNDLNDRL LSKHLIGGQN TKMVLDELVD RTSLTSHTLP EENEPAFTET TNEFVVSPMA 540
  541 MPSDIKAPSP TPPPPPMIFQ DDLLNEEPDH TPIAGSIAER EVKKWYNAVE MPNNPYSPEA 600
  601 LKQRISGTQE RYMDVPNISP SAEQKALASA LTENPDPPAP KADYKRYSRD YYINNAPTST 660
  661 DSTGGGKAAT TSAGEDVEDI VINEARKASQ TATEQNPPQE SISVYKATPV QVLDESLDSQ 720
  721 SNPSLYSLQT TTTNTSDESD TVRIYDFNKQ ETTVIRAAPA EQQPSESTTS SMESAQGAPP 780
  781 SVSSSIDSSV SQKRERPVVL QFGPGDSVPT IGSPASTPTR GSTPPAFRFL QPKRRLIDPS 840
  841 QVLSVDEDDV PEPTTPAAEK PVIEDEVAHS MPSVKALAQA FLLTSKHTQP QRRWRAKVRI 900
  901 AAPPDTPDKP NTSLAKRHKL EHAVSMAEVA DESTIASDLS SLETDPSIHS EATPPIASPA 960
  961 SPVPVRHGFL RSNIAFFENL KFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] PSI-BLAST 6.09691 Solution Structure of the RING domain of the Synaptotagmin-like protein 4
    2 View Details [136..251] deduced N/A No confident structure predictions are available.
    3 View Details [252..429] deduced N/A No confident structure predictions are available.
    4 View Details [430..615] MSA 1.134988 View MSA. No confident structure predictions are available.
    5 View Details [616..820] MSA 1.136993 View MSA. No confident structure predictions are available.
    6 View Details [821..983] MSA 2.124975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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