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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297784, FBp...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPYICLMEL PINRPGSGNL LLGLTSVVGL IGGAYLLQCG AQQLLGKLAN KKWRKEESSS  60
   61 EDHACNVCCA DLDLSSAKNY VTCCTCEKSV CRGPKCADWR PKDAKWECQL CQSSKESLAH 120
  121 TSSWVAEQMS FNQHKFVYPM RARSEVYIPI VGDGNDSSMQ FESVSQIGQN AHMDERAKIR 180
  181 EYVEEIVAEM LGGNLDHVKV GQLSKSENYL PAIVNGHTNN SNNNNNNNHA DSELADLSQT 240
  241 RLRSLIETII AETLRSSTLS ASGAVSEISL DTRSHVSDLA NGNGLKRRHR TEHYFEPKIY 300
  301 QDLLATAVLN KIVDKEGNTR LAAESTPDLS GRHIDENFNA EALSTTSGSS IEPRSDCSLT 360
  361 DHEIGLDNGK SQSLQTDLER ESVLSDYIAA HMVPLPDFSA SVTESEDDIG SISSGMIGDG 420
  421 NWEDNWLFKK KRSSATPSSI GMLVPAPREN VRAQIGDKTT DEVSDLSEIG SDIEESSLDL 480
  481 LRCNDLNDRL LSKHLIGGQN TKMVLDELVD RTSLTSHTLP EENEPAFTET TNEFVVSPMA 540
  541 MPSDIKAPSP TPPPPPMIFQ DDLLNEEPDH TPIAGSIAER EVKKWYNAVE MPNNPYSPEA 600
  601 LKQRISGTQE RYMDVPNISP SAEQKALASA LTENPDPPAP KADYKRYSRD YYINNAPTST 660
  661 DSTGGGKAAT TSAGEDVEDI VINEARKASQ TATEQNPPQE SISVYKATPV QVLDESLDSQ 720
  721 SNPSLYSLQT TTTNTSDESD TVRIYDFNKQ ETTVIRAAPA EQQPSESTTS SMESAQGAPP 780
  781 SVSSSIDSSV SQKRERPVVL QFGPGDSVPT IGSPASTPTR GSTPPAFRFL QPKRRLIDPS 840
  841 QVLSVDEDDV PEPTTPAAEK PVIEDEVAHS MPSVKALAQA FLLTSKHTQP QRRWRAKVRI 900
  901 AAPPDTPDKP NTSLAKRHKL EHAVSMAEVA DESTIASDLS SLETDPSIHS EATPPIASPA 960
  961 SPVPVRHGFL RSNIAFFENL KFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle