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Protein Overview: jing-PH, jing-PD

General Information:
Name(s) found: jing-PD / FBpp0290850 [FlyBase]
jing-PH / FBpp0112913 [FlyBase]
Description(s) found:
Found 42 descriptions.
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  • The gene jing is referred to in FlyBase by the symbol Dmel\jing (CG9397, FBgn0086655). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2389764..2506901. It has the cytological map location 42C1-42B2. There is experimental evidence that it has the molecular function</span>: transcription repressor activity. There is experimental evidence that it is involved in the biological process</span>: central nervous system development; border follicle cell migration; axon guidance; leg disc proximal/distal pattern formation; glial cell migration; tissue regeneration; imaginal disc-derived wing vein specification; specification of segmental identity, maxillary segment; open tracheal system development. 71 alleles are reported. The phenotypes of these alleles are annotated with 26 unique terms, many of which group under: embryonic nervous system; nervous system; organ system; embryonic neuron; embryonic glial cell; commissure; multi-cell-component structure; external compound sense organ; peripheral nervous system; adult trachea. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
  • The gene jing is referred to in FlyBase by the symbol Dmel\jing (CG9397, FBgn0086655). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2389764..2506901. It has the cytological map location 42C1-42B2. There is experimental evidence that it has the molecular function</span>: transcription repressor activity. There is experimental evidence that it is involved in the biological process</span>: central nervous system development; border follicle cell migration; axon guidance; leg disc proximal/distal pattern formation; glial cell migration; tissue regeneration; imaginal disc-derived wing vein specification; specification of segmental identity, maxillary segment; open tracheal system development. 71 alleles are reported. The phenotypes of these alleles are annotated with 26 unique terms, many of which group under: embryonic nervous system; nervous system; organ system; embryonic neuron; embryonic glial cell; commissure; multi-cell-component structure; external compound sense organ; peripheral nervous system; adult trachea. It has 5 annotated transcripts and 5 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1486 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS][NAS]
    Biological Process: central nervous system development [IMP]
    specification of segmental identity, maxillary segment [IEP][IGI]
    axon guidance [IMP]
    border follicle cell migration [IMP]
    imaginal disc-derived wing vein specification [IMP]
    regulation of transcription [NAS]
    tissue regeneration [IMP]
    open tracheal system development [IMP]
    leg disc proximal/distal pattern formation [IMP]
    glial cell migration [IMP]
    Molecular Function: transcription factor activity [NAS]
    zinc ion binding [IEA]
    transcription repressor activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPHILGSAS GSSSTAAASP PTSSASQTPP SPAIHHSHLS QHNATSAMSK PTTPQRHGNP  60
   61 SLLPTLQWPW NTSLGSTSTA VPAASANKNK RTAAGSGAAL GLSGEGSCLT GGGAASAKKA 120
  121 RSDLPGSFDA SKRLKVAAME ESQTKITGFF KSQMKPSPGG GKLSPQPGQQ SNPANTLTMS 180
  181 TPATTASLNK YFNILSQLKE QKAQQQQQQQ QASKTLPTPA PVAPVPSAPP VAPVVVTPSP 240
  241 SLPVPALKKI ERSNKQPAKI AQVAPNLRKT PSSGSSGSSS SSSSSSSNGS NTGKSPTKKH 300
  301 VAIAPRTPEM KQQQQQGKAA MVYRPPVTST ALKQKQISPP APVAAHTPAP APALNPTPAP 360
  361 ANPTLYQLPV QLPNLVQLPP QLAAAANIMQ LNNVAKAAVA AAATNNAAAQ AAQAAQAAAA 420
  421 QYFLNGTVFK LQQVTTATTT TATTATAAAA PAGNPFGLLN LATAGNPFGL PNANGQFPIE 480
  481 AIPGAGSYLH HQLLLARQNN MSLNETMASN SCGNMNFVNP LNNQQVGLKD NKLYIVNSAE 540
  541 YLGYLMSLQI ALNNQQHQQQ QIISATQPPP LAATNNNSTN TATQPPPLAA TNNTNSNTAN 600
  601 NSTASNSINH NASNNLSNIN NTAIQPQRAI VKPPLHSSTQ PPPLVTISSM PACSPAAASS 660
  661 PAAKRSLPAA KPYQKRLTAK GRVGTAPIIA TPTTPPPLVP TSATKELGQL RKSTGTTGTP 720
  721 TGTPTPTPPL VSIAPSKLTP TLSVSKQGPT MKLANSAPDL FDLVKNSKLV AKVSQPLTPL 780
  781 PFSSPSSSSN GSHGSHGMRS SPALSTSNSC TLSAFSKIKV ETTELASQTG SLTSSSIPTI 840
  841 SLKPQSFAGQ LPKREPESET DTLKHDLLPD CTNSNSNSNS CSSSTYSHSV SSAADLSLEA 900
  901 STPAPSPSPS ASPSGLGSPS PAASNLSASS RRAASQTDML SELVTSSCIS SGGDDCSQAT 960
  961 DSPPMPALPL AKSEDATTPI STVSGGSSSG SSNYDEEDDK SVASLETHQT HKRLRDLPTP1020
 1021 ESGIGGSLSN SESSNSIADA ISSKSASVGP PTTAASSASS SASDSNSLAS NAPSPASPED1080
 1081 CSAAPSPACS ASTTGSIPPS TVVDIAMVEA TSKSLPKSAI SPILSQPKTI RFPAGAGASG1140
 1141 KGGKRHDGVC YWDKCNKKHE SNSKLLDHMQ THHVNTQTGP FACLWVGCKV YNKESCSRRW1200
 1201 LERHVLSHGG SKQFKCIVEG CGLRFGSQLA LQKHVNNHFN ATDNARESTS KRTSDPPVPK1260
 1261 QLRKNGKKLR YRRQPFSARM FDFFDTGIME GLQHRLRQIS TLTNGAQAIE FQGQCMMRRR1320
 1321 NSQGGYECFV RWSPREIISD EWLPECLNRT RQHTKVLHIK QMRPAEKTRV DSLLSTAFRL1380
 1381 RYDSHLFADD YNVNEQQVGE ASGSDCDEDG DGDQEEEDLE DQDEDEEEDG SSSSRSASCE1440
 1441 TVSSYQQVLS IAKLQMQQRR KHPRKPPKVT PPAREKLVPT DALVPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] MSA 1.041981 View MSA. No confident structure predictions are available.
    2 View Details [139..291] MSA 1.055982 View MSA. No confident structure predictions are available.
    3 View Details [292..452] deduced N/A No confident structure predictions are available.
    4 View Details [453..609] deduced N/A No confident structure predictions are available.
    5 View Details [610..814] deduced N/A No confident structure predictions are available.
    6 View Details [815..999] deduced N/A No confident structure predictions are available.
    7 View Details [1000..1090] MSA 1.469995 View MSA. No confident structure predictions are available.
    8 View Details [1091..1208] PSI-BLAST 28.522879 Transcription factor IIIA, TFIIIA
    9 View Details [1209..1392] PSI-BLAST 45.09691 No description for 2i13A was found.
    10 View Details [1393..1486] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    9 No functions predicted.
    10 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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