| Protein: | jing-PH, jing-PD |
| Organism: | Drosophila melanogaster |
| Length: | 1486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for jing-PH, jing-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
905.0 | [0..793] | [1486..501] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MPPHILGSAS GSSSTAAASP PTSSASQTPP SPAIHHSHLS QHNATSAMSK PTTPQRHGNP 60
61 SLLPTLQWPW NTSLGSTSTA VPAASANKNK RTAAGSGAAL GLSGEGSCLT GGGAASAKKA 120
121 RSDLPGSFDA SKRLKVAA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-291] |
1 11 21 31 41 51
| | | | | |
1 MEESQTKITG FFKSQMKPSP GGGKLSPQPG QQSNPANTLT MSTPATTASL NKYFNILSQL 60
61 KEQKAQQQQQ QQQASKTLPT PAPVAPVPSA PPVAPVVVTP SPSLPVPALK KIERSNKQPA 120
121 KIAQVAPNLR KTPSSGSSGS SSSSSSSSSN GSN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [292-452] |
1 11 21 31 41 51
| | | | | |
1 TGKSPTKKHV AIAPRTPEMK QQQQQGKAAM VYRPPVTSTA LKQKQISPPA PVAAHTPAPA 60
61 PALNPTPAPA NPTLYQLPVQ LPNLVQLPPQ LAAAANIMQL NNVAKAAVAA AATNNAAAQA 120
121 AQAAQAAAAQ YFLNGTVFKL QQVTTATTTT ATTATAAAAP A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [453-609] |
1 11 21 31 41 51
| | | | | |
1 GNPFGLLNLA TAGNPFGLPN ANGQFPIEAI PGAGSYLHHQ LLLARQNNMS LNETMASNSC 60
61 GNMNFVNPLN NQQVGLKDNK LYIVNSAEYL GYLMSLQIAL NNQQHQQQQI ISATQPPPLA 120
121 ATNNNSTNTA TQPPPLAATN NTNSNTANNS TASNSIN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [610-814] |
1 11 21 31 41 51
| | | | | |
1 HNASNNLSNI NNTAIQPQRA IVKPPLHSST QPPPLVTISS MPACSPAAAS SPAAKRSLPA 60
61 AKPYQKRLTA KGRVGTAPII ATPTTPPPLV PTSATKELGQ LRKSTGTTGT PTGTPTPTPP 120
121 LVSIAPSKLT PTLSVSKQGP TMKLANSAPD LFDLVKNSKL VAKVSQPLTP LPFSSPSSSS 180
181 NGSHGSHGMR SSPALSTSNS CTLSA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [815-999] |
1 11 21 31 41 51
| | | | | |
1 FSKIKVETTE LASQTGSLTS SSIPTISLKP QSFAGQLPKR EPESETDTLK HDLLPDCTNS 60
61 NSNSNSCSSS TYSHSVSSAA DLSLEASTPA PSPSPSASPS GLGSPSPAAS NLSASSRRAA 120
121 SQTDMLSELV TSSCISSGGD DCSQATDSPP MPALPLAKSE DATTPISTVS GGSSSGSSNY 180
181 DEEDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1000-1090] |
1 11 21 31 41 51
| | | | | |
1 KSVASLETHQ THKRLRDLPT PESGIGGSLS NSESSNSIAD AISSKSASVG PPTTAASSAS 60
61 SSASDSNSLA SNAPSPASPE DCSAAPSPAC S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1091-1208] |
1 11 21 31 41 51
| | | | | |
1 ASTTGSIPPS TVVDIAMVEA TSKSLPKSAI SPILSQPKTI RFPAGAGASG KGGKRHDGVC 60
61 YWDKCNKKHE SNSKLLDHMQ THHVNTQTGP FACLWVGCKV YNKESCSRRW LERHVLSH
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [1209-1392] |
1 11 21 31 41 51
| | | | | |
1 GGSKQFKCIV EGCGLRFGSQ LALQKHVNNH FNATDNARES TSKRTSDPPV PKQLRKNGKK 60
61 LRYRRQPFSA RMFDFFDTGI MEGLQHRLRQ ISTLTNGAQA IEFQGQCMMR RRNSQGGYEC 120
121 FVRWSPREII SDEWLPECLN RTRQHTKVLH IKQMRPAEKT RVDSLLSTAF RLRYDSHLFA 180
181 DDYN
|
| Detection Method: | |
| Confidence: | 45.09691 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1393-1486] |
1 11 21 31 41 51
| | | | | |
1 VNEQQVGEAS GSDCDEDGDG DQEEEDLEDQ DEDEEEDGSS SSRSASCETV SSYQQVLSIA 60
61 KLQMQQRRKH PRKPPKVTPP AREKLVPTDA LVPI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
