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Protein Overview: tomboy40-PA

General Information:
Name(s) found: tomboy40-PA / FBpp0085338 [FlyBase]
Description(s) found:
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  • gi|7302172|gb|AAF57268.1| tomboy40 [Drosophila melanogaster] [NCBI NR]
  • gi|24585986|ref|NP_610213.1| tomboy40 [Drosophila melanogaster] [NCBI NR]
  • gi|215274658|sp|A1Z6L1.1|TO402_DROME RecName: Full=Mitochondrial import receptor subunit TOM40 homolog 2; AltName: Full=Translocase of outer membrane 40 kDa subunit homolog 2 [NCBI NR]
  • Mitochondrial import receptor subunit TOM40 homolog 2 OS=Drosophila melanogaster GN=tomboy40 PE=2 SV=1 [Swiss-Prot]
  • The gene tomboy40 is referred to in FlyBase by the symbol Dmel\tomboy40 (CG8330, FBgn0033074). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:2113132..2114389. It has the cytological map location 42A14. Based on sequence similarity, it is predicted to have molecular function</span>: P-P-bond-hydrolysis-driven protein transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: protein targeting to mitochondrion. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8330-PA translation from_gene[CG8330 CG8330 FBgn0033074] seq_release:3 mol_weight=36983 cds_boundaries:(2R:1,364,190..1,365,209[+]) aa_length:340 transcript_info:[CG8330-RA seq_release:3] gene_info:[gene symbol:CG8330 FBgn0033074 gene_boundaries:(2R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V9L9) CG8330 protein [DrosMelano7227.FASTAC.txt]
  • (AE003784) CG8330 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8330-PA [Drosophila melanogaster]gi|24585986|ref|NP_610213.1| CG8330-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:2113230..2114252; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268; MD5=41d18b59716e00cff014c12adf [fly-100309-contam.fasta]
  • tomboy40 CG8330-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG8330-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:2113230..2114252; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:2113230..2114252; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:2113230..2114252; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268,FlyMine:FBpp0085338,modMine:FBpp0085338; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:6225725..6226747; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268,FlyMine:FBpp0085338,modMine:FBpp0085338; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:6225725..6226747; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268,FlyMine:FBpp0085338,modMine:FBpp0085338; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0085338 type=protein; loc=2R:6225725..6226747; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268,FlyMine:FBpp0085338,modMine:FBpp0085338; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:6225725..6226747; ID=FBpp0085338; name=tomboy40-PA; parent=FBgn0033074,FBtr0085994; dbxref=FlyBase:FBpp0085338,FlyBase_Annotation_IDs:CG8330-PA,GB_protein:AAF57268.1,REFSEQ:NP_610213,GB_protein:AAF57268,UniProt/Swiss-Prot:A1Z6L1,FlyMine:FBpp0085338,modMine:FBpp0085338; MD5=41d18b59716e00cff014c12adf8ba23a; length=340; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    mitochondrial outer membrane translocase complex [ISS]
    Biological Process: protein targeting to mitochondrion [ISS]
    transmembrane transport [IEA]
    anion transport [IEA]
    Molecular Function: voltage-gated anion channel activity [IEA]
    P-P-bond-hydrolysis-driven protein transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVMASTAD AESSRGRGHL SAGLRLPEAP QYSGGVPPQM VEALKAEAKK PELTNPGTLE  60
   61 ELHSRCRDIQ ANTFEGAKIM VNKGLSNHFQ VTHTINMNSA GPSGYRFGAT YVGTKQYGPT 120
  121 EAFPVLLGEI DPMGNLNANV IHQLTSRLRC KFASQFQDSK LVGTQLTGDY RGRDYTLTLT 180
  181 MGNPGFFTSS GVFVCQYLQS VTKRLALGSE FAYHYGPNVP GRQVAVLSAV GRYAFGDTVW 240
  241 SCTLGPAGFH LSYYQKASDQ LQIGVEVETN IRQQESTATV AYQIDLPKAD LVFRGSLDSN 300
  301 WLISGVLEKR LQPLPFSLAI SGRMNHQKNS FRLGCGLMIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] MSA 6.118994 View MSA. No confident structure predictions are available.
    2 View Details [145..340] MSA 8.122989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle