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Protein Overview: CG5343-PA

General Information:
Name(s) found: CG5343-PA / FBpp0079634 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5343 (CG5343, FBgn0032248). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10429920..10430914. It has the cytological map location 31E1. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: dendrite morphogenesis; neuron development; muscle organ development. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    Biological Process: muscle organ development [IMP]
    neuron development [IMP]
    regulation of transcription [ISS]
    dendrite morphogenesis [IMP]
    nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNTFQSGF LSILYSIGSK PLQLWDKKVR NGHIKRITDN DIQSLVLEIV GTNVSTTFIT  60
   61 CPADPKKTLG IKLPFLVMII KNMKKYFTFE VQVLDDKNVR RRFRASNYQS TTRVKPFICT 120
  121 MPMRLDEGWN QIQFNLSDFT RRAYGTNYVE TLRVQIHANC RIRRVYFSDR LYSEDELPPE 180
  181 FKLFLPIQKP VQKSNAICS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] Pfam 174.443697 No description for PF05018.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle