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Protein Overview: mRpS7-PA, FBpp03...

General Information:
Name(s) found: FBpp0304503 [FlyBase]
mRpS7-PA / FBpp0079597 [FlyBase]
Description(s) found:
Found 30 descriptions.
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  • type=protein; loc=2L:join(10386744..10386787,10386862..10387474); ID=FBpp0304503; name=mRpS7-PB; parent=FBgn0032236,FBtr0332194; dbxref=FlyBase:FBpp0304503,FlyBase_Annotation_IDs:CG5108-PB,REFSEQ:NP_001260339,GB_protein:AGB92874; MD5=01506ba78901d4104c0e2554cec4fd36; length=218; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein S7 is referred to in FlyBase by the symbol Dmel\mRpS7 (CG5108, FBgn0032236). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:10386664..10387524. It has the cytological map location 31D11. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome; RNA binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [ISS]
    mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: RNA binding [ISS]
    structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLGRIAEK TSRLSCLRLM SVYPTHYVEP IVQKYKQLEQ KNDLSKLYHV PIKAAVNKSS  60
   61 DTIFHDDTKH KMINYITKKG NSALARTLLS KTLELIKRTQ TEHMNLAKGE KTTINTNPET 120
  121 LLKQAVENCR PLLQVTAIKR GGVTYQVPVP ITTKRSYFLA MKWLLEAARE KERKVSLPEK 180
  181 LAWEILDAAH GQGRVIKRKD DLHRLCESNR AYAHYRWS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 56.522879 RIBOSOMAL PROTEIN S7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.1836043075256 bayes_pls_golite062009
  • structural molecule activity
    		•  9.60531852031349 bayes_pls_golite062009
  • RNA binding
    		•  2.69930050072854 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.46100724116736 bayes_pls_golite062009
  • binding
    		•  0.87606732735391 bayes_pls_golite062009
  • protein binding
    		•  0.060050417638174 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle