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Protein Overview: FBpp0302627, Dref-PA

General Information:
Name(s) found: FBpp0302627 [FlyBase]
Dref-PA / FBpp0079485 [FlyBase]
Description(s) found:
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  • pir||T00096 DNA replication-related element factor DREF - fruit fly (Drosophila melanogaster) [NCBI NR]
  • gi|7297587|gb|AAF52841.1| DNA replication-related element factor [Drosophila melanogaster] [NCBI NR]
  • gi|2879931|dbj|BAA24827.1| DREF [Drosophila melanogaster] [NCBI NR]
  • gi|17737403|ref|NP_523529.1| DNA replication-related element factor [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB,REFSEQ:NP_001260311,GB_protein:AGB92846; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r5.56; species=Dmel; [FlyBase]
  • The gene DNA replication-related element factor is referred to in FlyBase by the symbol Dmel\Dref (CG5838, FBgn0015664). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:9964147..9967455. It has the cytological map location 30F2-30F3. It is reported to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization; regulation of transcription from RNA polymerase II promoter. 18 alleles are reported. The phenotypes of these alleles are annotated with: wing vein L5; wing margin; eye disc; eye; interommatidial bristle; wing; ommatidium; melanotic mass. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5838-PA translation from_gene[CG5838 Dref FBgn0015664] seq_release:3 mol_weight=80728 cds_boundaries:(2L:9,956,957..9,959,294[-]) aa_length:709 transcript_info:[CG5838-RA seq_release:3] gene_info:[gene symbol:Dref FBgn0015664 gene_boundaries:(2L:9,9 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q94883) DREF protein [DrosMelano7227.FASTAC.txt]
  • (AE003626) Dref gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5838-PA [Drosophila melanogaster]gi|17737403|ref|NP_523529.1| CG5838-PA [Drosophila melanogaster]gi|7511844|pir||T00096 DNA replication-related element factor DREF - fruit fly (Drosophila melanogaster)gi|2879931|dbj|BAA24827.1| DREF [Drosophila mela [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP [fly-100309-contam.fasta]
  • DNA replication-related element factor CG5838-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5838-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • DREF [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • DNA replication-related element factor OS=Drosophila melanogaster GN=Dref PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841,FlyMine:FBpp0079485,modMine:FBpp0079485; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(9964545..9964867,9964928..9965315,9965376..9965668,9965760..9966885); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • DNA replication-related element factor OS=Drosophila melanogaster GN=Dref PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841,FlyMine:FBpp0079485,modMine:FBpp0079485; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB,REFSEQ:NP_001260311,GB_protein:AGB92846; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841,FlyMine:FBpp0079485,modMine:FBpp0079485; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB,REFSEQ:NP_001260311,GB_protein:AGB92846; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • DNA replication-related element factor, isoform A OS=Drosophila melanogaster GN=Dref PE=1 SV=2 [DROME.fasta.20160308]
  • FBpp0079485 type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841,FlyMine:FBpp0079485,modMine:FBpp0079485; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0302627 type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB,REFSEQ:NP_001260311,GB_protein:AGB92846; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0079485; name=Dref-PA; parent=FBgn0015664,FBtr0079889; dbxref=FlyBase_Annotation_IDs:CG5838-PA,FlyBase:FBpp0079485,GB_protein:AAF52841.1,REFSEQ:NP_523529,GB_protein:AAF52841,UniProt/TrEMBL:Q94883,FlyMine:FBpp0079485,modMine:FBpp0079485; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2L:complement(join(9965760..9966885,9965376..9965668,9964928..9965315,9964545..9964867)); ID=FBpp0302627; name=Dref-PB; parent=FBgn0015664,FBtr0310483; dbxref=FlyBase:FBpp0302627,FlyBase_Annotation_IDs:CG5838-PB,REFSEQ:NP_001260311,GB_protein:AGB92846,UniProt/TrEMBL:Q94883; MD5=3f2b29c47da4b2bf4728d6c75109a053; length=709; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 709 amino acids

    Gene Ontology:
    Cellular Component: transcription factor complex [IPI]
    Biological Process: DNA replication [TAS]
    mitotic spindle organization [IMP]
    regulation of transcription, DNA-dependent [TAS]
    mitochondrial DNA replication [TAS]
    regulation of cell cycle [NAS]
    regulation of transcription from RNA polymerase II promoter [IMP]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEGVPASPV AIGELKYEDV SQLNFSKLYS PKMKSVYWRY FGFPSNDNNE VITKQNVVCI  60
   61 KCHKVLTNHG NTTNLRAHLQ HRHKDLFKEL CQEHDIHVPP RKTPRNVSHP PLSKRNVSSR 120
  121 RVKLEFINNR NHDNASDDEL DEAAVATAAM QAEEDASSQT MLYETMVPFT YDEAENLVEE 180
  181 EERLVMEPKY GRKRKVATPS SALMHGRVIK HEEGGYAAVA NIANLAEALT DIVIKDLRNV 240
  241 DSLYDAGFGE FLRQVLGNSA AMPEPHKIDS LINEMHASKF LEIGEITRDF TSEKPFSLAF 300
  301 EMWVNVEQRR FLSIFHHFLD EETHSVRGML YATVEYNDYI VFDDLLTDFY LANCTLAIIN 360
  361 YDEEEDLLHT YLREKNIPIS LCYVSVIDKC LRRVFEIEEV ATLLEQVKDL MQRHSTEIAS 420
  421 KVSEVPMPTY NEHFPWTLYE TLKFFAESIS WSEDMDHLVI SAKTVTEALS ALVIALDTLR 480
  481 GEDIPLCSML SPITSKILIK KLGIAEQDDP LMMNLKRTIS SVLQAHVISN DNLTAAALLD 540
  541 PRFHRLTTID NLERTVRMLT HKYNINFGGV GEGESNEVAA TSSVVAIKSE PRVVDGSAPK 600
  601 KLGLKLLFDS NEIPNPPKRD ADSSVESDLK RYRNEVVVQL DESPIEWWLK MGHIYGTLRD 660
  661 LASLYHSVPG VVTLSFKKAL RDQIYDFNKR FMLTGSHIDA ILFLHHHNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle