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Protein Overview: FBpp0309852, CG1...

General Information:
Name(s) found: FBpp0309852 [FlyBase]
CG11015-PA / FBpp0078918 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2L:join(6557903..6557984,6558418..6558591,6558939..6559045); ID=FBpp0309852; name=CoVb-PB; parent=FBgn0031830,FBtr0343157; dbxref=FlyBase:FBpp0309852,FlyBase_Annotation_IDs:CG11015-PB; MD5=e7613afadd5a9bbbda5b81dab4455c96; length=120; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG11015 (CG11015, FBgn0031830). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:6557800..6559308. It has the cytological map location 26E3. Based on sequence similarity, it is predicted to have molecular function</span>: cytochrome-c oxidase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mitochondrial electron transport, cytochrome c to oxygen. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 120 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    mitochondrion [ISS]
    mitochondrial respiratory chain complex IV [ISS]
    Biological Process: mitochondrial electron transport, cytochrome c to oxygen [ISS]
    Molecular Function: cytochrome-c oxidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASICGRMAL RAAARQNVAY TPVRFCKMMN DPLEHATGIE KRELLLKAAG NDNPFDMKVF  60
   61 KRGAGTKENP NLIPSAFDAR IVGCICEEDQ TYVQWMWLQK GNQKRCECGH WFKLVEKAAV 120
  121

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 38.30103 Cytochrome c oxidase Subunit F

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  11.8078336041861 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  11.8078336041861 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  11.8078336041861 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  11.4955994709345 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  5.35533851539468 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  5.20400060522221 bayes_pls_golite062009
  • electron carrier activity
    		•  4.79439258177657 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  4.61075334342911 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.60275002826443 bayes_pls_golite062009
  • transporter activity
    		•  1.97498735657997 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.91183744916449 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.8957438694805 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.85081519357893 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.8134262516178 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.76519144994124 bayes_pls_golite062009
  • binding
    		•  1.21177849202369 bayes_pls_golite062009
  • catalytic activity
    		•  0.176396048613815 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle