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Protein Overview: oho23B-PB, FBpp0...

General Information:
Name(s) found: FBpp0307130 [FlyBase]
oho23B-PB / FBpp0077309 [FlyBase]
FBpp0077308 [FlyBase]
oho23B-PA / FBpp0077307 [FlyBase]
Description(s) found:
Found 58 descriptions.
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  • type=protein; loc=2L:join(2856256..2856305,2856377..2856568,2856631..2856640); ID=FBpp0307130; name=RpS21-PF; parent=FBgn0015521,FBtr0335131; dbxref=REFSEQ:NP_001259970,GB_protein:AGB92507,FlyBase:FBpp0307130,FlyBase_Annotation_IDs:CG2986-PF; MD5=fb6c903128cd355b6618a5ee72363077; length=83; release=r5.56; species=Dmel; [FlyBase]
  • The gene overgrown hematopoietic organs at 23B is referred to in FlyBase by the symbol Dmel\oho23B (CG2986, FBgn0015521). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:2856070..2857041. It has the cytological map location 23B5-23B6. There is experimental evidence that it has the molecular function</span>: ribosome binding. There is experimental evidence that it is involved in the biological process</span>: lymph gland development. 10 alleles are reported. The phenotypes of these alleles are annotated with: lymph gland; dorsal mesothoracic disc; macrochaeta; embryonic/larval hemocyte; anterior lymph gland pair; imaginal disc; larval brain; scutum; ventral thoracic disc. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • type=protein; loc=2L:join(2856256..2856305,2856377..2856568,2856631..2856640); ID=FBpp0077308; name=RpS21-PD; parent=FBgn0015521,FBtr0077622; dbxref=FlyBase:FBpp0077308,FlyBase_Annotation_IDs:CG2986-PD,GB_protein:AAN10394.1,GB_protein:AAN10394,REFSEQ:NP_722855; MD5=fb6c903128cd355b6618a5ee72363077; length=83; release=r5.56; species=Dmel; [FlyBase]
  • The gene overgrown hematopoietic organs at 23B is referred to in FlyBase by the symbol Dmel\oho23B (CG2986, FBgn0015521). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:2856070..2857041. It has the cytological map location 23B5-23B6. There is experimental evidence that it has the molecular function</span>: ribosome binding. There is experimental evidence that it is involved in the biological process</span>: lymph gland development. 10 alleles are reported. The phenotypes of these alleles are annotated with: lymph gland; dorsal mesothoracic disc; macrochaeta; embryonic/larval hemocyte; anterior lymph gland pair; imaginal disc; larval brain; scutum; ventral thoracic disc. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 83 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    cytosolic small ribosomal subunit [ISS]
    Biological Process: lymph gland development [IMP]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]
    ribosome binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENDAGENVD LYVPRKCSAS NRIIHAKDHA SVQLSIVDVD PETGRQTDGS KTYAICGEIR  60
   61 RMGESDDCIV RLAKKDGIIT KNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] Pfam 54.244125 No description for PF01249.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle