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Protein Overview: CG9960-PA

General Information:
Name(s) found: CG9960-PA / FBpp0099795 [FlyBase]
Description(s) found:
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  • gi|78706836|ref|NP_001027221.1| CG9960 [Drosophila melanogaster] [NCBI NR]
  • gi|7295917|gb|AAF51216.1| CG9960 [Drosophila melanogaster] [NCBI NR]
  • ref|NP_787966.1| CG32951-PB [Drosophila melanogaster] [NCBI NR]
  • gi|17861576|gb|AAL39265.1| GH13185p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9960 (CG9960, FBgn0031454). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:2758427..2759710. It has the cytological map location 23A3. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: methyltransferase activity; nucleic acid binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: methylation. No alleles are reported. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG32951-PB translation from_gene[CG32951 CG32951 FBgn0052951] seq_release:3 mol_weight=25217 cds_boundaries:(2L:2,751,122..2,751,793[-]) aa_length:224 transcript_info:[CG32951-RB seq_release:3] gene_info:[gene symbol:CG32951 FBgn0052951 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VQF8) CG9960 protein (GH13185p) [DrosMelano7227.FASTAC.txt]
  • (AE003582) CG9960 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG32951-PB, isoform B [Drosophila melanogaster]gi|17861576|gb|AAL39265.1| GH13185p [Drosophila melanogaster]gi|28574764|ref|NP_787966.1| CG32951-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216; MD5=ab2b1c833118b [fly-100309-contam.fasta]
  • GH13185p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9960-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG9960 OS=Drosophila melanogaster GN=snapin PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216,FlyMine:FBpp0099795,modMine:FBpp0099795; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216,FlyMine:FBpp0099795,modMine:FBpp0099795; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216,FlyMine:FBpp0099795,modMine:FBpp0099795; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG9960 OS=Drosophila melanogaster GN=snapin-RA PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0099795 type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216,FlyMine:FBpp0099795,modMine:FBpp0099795; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(2758550..2759224); ID=FBpp0099795; name=CG9960-PA; parent=FBgn0031454,FBtr0100383; dbxref=FlyBase_Annotation_IDs:CG9960-PA,FlyBase:FBpp0099795,GB_protein:AAF51216.1,REFSEQ:NP_001027221,GB_protein:AAF51216,UniProt/TrEMBL:Q9VQF8,FlyMine:FBpp0099795,modMine:FBpp0099795; MD5=ab2b1c833118b2eb34fbbd296b633309; length=224; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 224 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: methylation [IEA]
    Molecular Function: nucleic acid binding [IEA]
    methyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METPYTDHLS PEDFEHVYEP AEDSFLLLDA LEKDLEYLDR LQPSLCVELG SGSGVIITAL  60
   61 AKKLAGFSLC LATDINPKAC NATRRTATRN GARLDSIRCS LADALRPRSV DVLLFNPPYV 120
  121 VTSDEELQTQ QFDSHSESST DRNLVFSWAG GQDGRRVTDI LLKQLDDILS PRGVLYLLLL 180
  181 RENKPEEIIK YLEGLQFRAV KFMERRIPGE HLCILKVTRY LASS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 31.09691 Crystal Structure Analysis of E.coli Protein (N5)-Glutamine Methyltransferase (HemK)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein methyltransferase activity
    		•  5.03267617653315 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  4.4632173842967 bayes_pls_golite062009
  • methyltransferase activity
    		•  4.15445027778357 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  4.07806017452628 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  4.07153733729662 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  3.97658336148086 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
    		•  3.26663548517117 bayes_pls_golite062009
  • arginine N-methyltransferase activity
    		•  3.26663548517117 bayes_pls_golite062009
  • transferase activity
    		•  2.926540904444 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
    		•  2.86617323549909 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
    		•  2.48017990451667 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  2.18991764495147 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  1.91133457052099 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
    		•  1.69391860928068 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.61435611638306 bayes_pls_golite062009
  • DNA binding
    		•  1.53375495589674 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.31440474302645 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • protein-arginine omega-N symmetric methyltransferase activity
    		•  1.15089820497406 bayes_pls_golite062009
  • binding
    		•  0.976078016260105 bayes_pls_golite062009
  • protein binding
    		•  0.871386560666009 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  0.817509452491588 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  0.703178429468566 bayes_pls_golite062009
  • lysine N-methyltransferase activity
    		•  0.469870476227704 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
    		•  0.469870476227704 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
    		•  0.469870476227704 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  0.230719796976667 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle