Protein Overview: RS25_RAT

General Information:
Name(s) found:	RS25_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|74355904\|gb\|AAI03659.1\| Ribosomal protein s25 [Rattus norvegicus] [NCBI NR] pir\|\|R3RT25 ribosomal protein S25, cytosolic [validated] - rat [NCBI NR] gi\|62653425\|ref\|XP_579143.1\| PREDICTED: ribosomal protein s25 [Rattus norvegicus] [NCBI NR] gi\|57724\|emb\|CAA44349.1\| ribosomal protein S25 [Rattus norvegicus] [NCBI NR] gi\|53850582\|ref\|NP_001005528.1\| ribosomal protein s25 [Rattus norvegicus] [NCBI NR] gi\|51338621\|sp\|P62853.1\|RS25_RAT RecName: Full=40S ribosomal protein S25 [NCBI NR] gi\|149041472\|gb\|EDL95313.1\| rCG58393, isoform CRA_a [Rattus norvegicus] [NCBI NR] gi\|149041471\|gb\|EDL95312.1\| rCG58393, isoform CRA_a [Rattus norvegicus] [NCBI NR] 40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):4-126225355 40S ribosomal protein S25 [hmr_yeast5_DM3-1_pombe.fasta] similar to 40S ribosomal protein S25 [HMR_022704-rand.fasta] PREDICTED: similar to ribosomal protein S25; 40S ribosomal protein S25 [Pan troglodytes]gi\|53850582\|ref\|NP_001005528.1\| ribosomal protein s25 [Rattus norvegicus]gi\|4506707\|ref\|NP_001019.1\| ribosomal protein S25 [Homo sapiens]gi\|28372479\|ref\|NP_077228.1 [nrdb_11152004_Chlamydomonas] Tax_Id=10116 40S ribosomal protein S25 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] 40S ribosomal protein S25 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ribosomal protein s25 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] rCG58393, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Ribosomal protein s25 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ribosomal protein S25 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 40S RIBOSOMAL PROTEIN S25 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Rps25 40S ribosomal protein S25 [rat-ipi-250309-contam.fasta] 40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	125 amino acids
Gene Ontology:
Cellular Component:	cytosolic small ribosomal subunit [UNKNOWN][IDA] cytosol [UNKNOWN] small ribosomal subunit [UNKNOWN] nucleolus [UNKNOWN][IEA] ribosome [UNKNOWN][IEA]
Biological Process:	ribosomal small subunit assembly [IMP] translational elongation [UNKNOWN]
Molecular Function:	protein binding [UNKNOWN][IEA] structural constituent of ribosome [IMP]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MPPKDDKKKK DAGKSAKKDK DPVNKSGGKA KKKKWSKGKV RDKLNNLVLF DKATYDKLCK 60 61 EVPNYKLITP AVVSERLKIR GSLARAALQE LLSKGLIKLV SKHRAQVIYT RNTKGGDAPA 120 121 AGEDA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..125]	FFAS03	1.1	No description for 2j5oA was found.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle