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Protein Overview: CCL7_RAT

General Information:
Name(s) found: CCL7_RAT [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • C-C motif chemokine 7 OS=Rattus norvegicus GN=Ccl7 PE=3 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 97 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [IEA]
    extracellular region [UNKNOWN][IEA]
    Biological Process: chemotaxis [IEA]
    inflammatory response [IEA]
    immune response [IEA]
    Molecular Function: heparin binding [IEA]
    chemokine activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQISAALLCV LLTAAAFTVH VWAQPDGTNS STCCYVKKQK IPKRNLKSYR KITSSRCPWE  60
   61 AVIFKTKKGM EVCAEAHQKW VEEAIAYLDM KTSTPKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] PSI-BLAST 18.0 MONOCYTE CHEMOATTRACTANT PROTEIN-3, NMR, MINIMIZED AVERAGE STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytokine activity
    		•  8.07273475133641 bayes_pls_golite062009
  • chemokine receptor binding
    		•  7.19574940007631 bayes_pls_golite062009
  • chemokine activity
    		•  7.19574940007631 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  7.12866319987718 bayes_pls_golite062009
  • receptor binding
    		•  5.98215849587665 bayes_pls_golite062009
  • interleukin-8 receptor binding
    		•  3.38222613878416 bayes_pls_golite062009
  • binding
    		•  3.18185781962524 bayes_pls_golite062009
  • chemoattractant activity
    		•  3.05299139114464 bayes_pls_golite062009
  • protein binding
    		•  2.65575365603289 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  2.01356463888902 bayes_pls_golite062009
  • CCR2 chemokine receptor binding
    		•  1.78317158345185 bayes_pls_golite062009
  • heparin binding
    		•  1.60145567013126 bayes_pls_golite062009
  • protein kinase activity
    		•  1.11665578876448 bayes_pls_golite062009
  • pattern binding
    		•  1.02739535268516 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.997577673837017 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.8745248884958 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.747306649348464 bayes_pls_golite062009
  • CCR chemokine receptor binding
    		•  0.697359799598971 bayes_pls_golite062009
  • signal transducer activity
    		•  0.538293194555496 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.538293194555496 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.49941396747283 bayes_pls_golite062009
  • kinase activity
    		•  0.13066012693904 bayes_pls_golite062009
  • catalytic activity
    		•  0.11400259673574 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.0194812295164102 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle