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Protein Overview: SCFD1_RAT

General Information:
Name(s) found: SCFD1_RAT [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • Sec1 family domain-containing protein 1 OS=Rattus norvegicus GN=Scfd1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 637 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [IEA]
    Golgi transport complex [IDA]
    cis-Golgi network [UNKNOWN][IEA]
    cytoplasm [IEA]
    Golgi cisterna membrane [IEA]
    endoplasmic reticulum [IEA]
    Golgi apparatus [IEA]
    Golgi-associated vesicle [IDA]
    plasma membrane [IDA]
    Biological Process: ER to Golgi vesicle-mediated transport [TAS]
    response to hypoxia [IEP]
    vesicle-mediated transport [IEA]
    regulation of ER to Golgi vesicle-mediated transport [IMP]
    retrograde vesicle-mediated transport, Golgi to ER [IMP]
    vesicle docking during exocytosis [IEA]
    protein transport [IEA]
    post-Golgi vesicle-mediated transport [IDA]
    response to toxin [UNKNOWN][IEA]
    Molecular Function: protein binding [IPI]
    syntaxin binding [TAS]
    protein N-terminus binding [IPI]
    syntaxin-5 binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGSKMAASI RERQTVALKR MLNFNVPHVK NSPGEPVWKV LIYDRFGQDI ISPLLSVKEL  60
   61 RDMGITLHLL LHSDRDPIRD VPAVYFVMPT EENIDRLCQD LRNQLYESYY LNFISAISRS 120
  121 KLEDIANAAL AANAVTQVAK VFDQYLNFIT LEEDMFVLCN QNKELVSYRA INRPDITDTE 180
  181 METVMDTIVD SLFCFFVTLG AVPIIRCSRG TAAEMVAVKL DKKLRENLRD ARNSLFTGDP 240
  241 LGTGQFSFQR PLLVLVDRNI DLATPLHHTW TYQALVHDVL DFHLNRVNLE ESTGVENSPT 300
  301 GARPKRKNKK SYDLTPVDKF WQKHKGSPFP EVAESVQQEL ESYRAQEDEV KRLKSIMGLE 360
  361 GEDEGAISML SDNTAKLTSA VSSLPELLEK KRLIDLHTNV ATAVLEHIKA RKLDVYFEYE 420
  421 EKIMSKTTLD KSLLDVISDP DAGTPEDKMR LFLIYYISAQ QAPSEVDLEQ YKKALTDAGC 480
  481 NLSPLQYIKQ WKAFAKMAST PASYGNTTTK PMGLLSRVMN TGSQFVMEGV KNLVLKQQNL 540
  541 PVTRILDNLM EMKSNPETDD YRYFDPKMLR SNDSSVPRNK SPFQEAIVFV VGGGNYIEYQ 600
  601 NLVDYIKGKQ GKHILYGCSE IFNATQFIKQ LSQLGQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle