Protein Overview: CDHR1_RAT

General Information:
Name(s) found:	CDHR1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81871530\|sp\|Q91XU7.1\|PCD21_RAT RecName: Full=Protocadherin-21; AltName: Full=Photoreceptor cadherin; Short=prCAD; AltName: Full=MT-protocadherin; Flags: Precursor [NCBI NR] gi\|17865341\|ref\|NP_446024.1\| protocadherin 21 [Rattus norvegicus] [NCBI NR] gi\|149036231\|gb\|EDL90897.1\| MT-protocadherin [Rattus norvegicus] [NCBI NR] gi\|14625447\|dbj\|BAB61906.1\| MT-protocadherin [Rattus norvegicus] [NCBI NR] Protocadherin-21 OS=Rattus norvegicus GN=Pcdh21 PE=2 SV=1 [Swiss-Prot] Cadherin-related family member 1 OS=Rattus norvegicus GN=Cdhr1 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):16-13216239;16-13216239 MT-protocadherin [hmr_yeast5_DM3-1_pombe.fasta] MT-protocadherin [HMR_022704-rand.fasta] MT-protocadherin [Rattus norvegicus]gi\|14625447\|dbj\|BAB61906.1\| MT-protocadherin [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 MT-protocadherin [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_053572) MT-protocadherin [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Protocadherin-21 precursor (Photoreceptor cadherin) (prCAD) (MT-protocadherin) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] protocadherin 21 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] MT-protocadherin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Pcdh21 Protocadherin-21 [rat-ipi-250309-contam.fasta] protocadherin 21 precursor [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Cadherin-related family member 1 OS=Rattus norvegicus GN=Cdhr1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	859 amino acids
Gene Ontology:
Cellular Component:	integral to plasma membrane [UNKNOWN][IEA] plasma membrane [IEA]
Biological Process:	photoreceptor cell maintenance [UNKNOWN][IEA] cell adhesion [IEA] homophilic cell adhesion [IEA] cellular process [UNKNOWN] response to stimulus [IEA]
Molecular Function:	calcium ion binding [IEA] receptor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRGPQVALV LGLLCIYLAQ ANFAPHFFDN GVGSTNGNMA LFSLPEDTPV GSHVYTLNGT  60
   61 DPEGDPISYH ISFDPSTRSV FSVDPNFGNI TLVEELDRER EDEIEAIISI SDGLNLVAEK 120
  121 VVIVVTDAND EAPRFLQEPY NILVPENTPA GSSIFKVQAE DKDTGSGGSV TYFLQSLHSS 180
  181 KFTVDRHSGV LRLQAGATLD YEKSRAHFIT VVAKDGGGRL RGADVVFSAT TTVTINVEDV 240
  241 QDTAPIFVGT PYYGYVYEDT LPGSEVLTVV AIDGDRGKPN HILYRLLNES DGLFEINETS 300
  301 GAISVLQSPA QLRREVYELH VQVTEVNSSG SPAAQSTVPV IIRIVDLNNH PPTFYGESGP 360
  361 QNKFELSMFE HPPQGEILRG LKITVNDSDQ GANAKFNLRL VGPGGIFRVV PQTVLNEAQV 420
  421 TIIVENSAAI DFEKSKSLTF KLLAIEVNTP EKFSSTADIV IQLLDTNDNV PKFTSHYYIA 480
  481 RIPENVPGGS NVVAVTAVDP DTGPWGKVQY SIYGTGSDLF LIHPSTGLIY TQPWASLDAE 540
  541 GTSRYNFYVK AEDMDGRYSL AEVFVTLLDV NDHYPQFVQS VQEKTMVLGT PLKIEATDQD 600
  601 AEEPNNLVDY SITRAEPVNV FDIDAHTGEI RLKNSIRSLE ALHNITPSGE YSWSLQVQAK 660
  661 DRGSPSFSTT ALLKIDITDT ERLSRSSMAA FLIQTKDNPM KAVGVLAGVM AIVVAITVLI 720
  721 STATFWRNKK SNKVLPVRRV LRRRPSPAPH TVRIEWLKFR RAKAASKFIL KEDPPNENCN 780
  781 NSRVGVTVPP RAPALPPPPK MASSTVAQQT VPTVSGSLTP QPSQQLPTPK PLGGPAQSSL 840
  841 VSELKQKFEK KSLGNKAYV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: CDHR1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: