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Protein Overview: gi|149044345, gi...

General Information:
Name(s) found: gi|34933194 [NCBI NR]
gi|34881918 [NCBI NR]
gi|157818563 [NCBI NR]
gi|149044345 [NCBI NR]
gi|109511495 [NCBI NR]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • gi|34933194|ref|XP_343764.1| PREDICTED: similar to Norrin precursor (Norrie disease protein homolog) [Rattus norvegicus] [NCBI NR]
  • ref|XP_347262.1| similar to NDP [Rattus norvegicus] [NCBI NR]
  • gi|157818563|ref|NP_001102284.1| norrin [Rattus norvegicus] [NCBI NR]
  • gi|149044345|gb|EDL97666.1| Norrie disease homolog (human) (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|109511495|ref|XP_001058815.1| PREDICTED: similar to Norrin precursor (Norrie disease protein homolog) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    placenta development [UNKNOWN]
    Molecular Function: receptor binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNHVLAASI SMLSLLAIMG DTDSKTDSSF LMDSQRCMRH HYVDSISHPL YKCSSKMVLL  60
   61 ARCEGHCSQA SRSEPLVSFS TVLKQPFRSS CHCCRPQTSK LKALRLRCSG GMRLTATYRY 120
  121 ILSCHCEECS S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] FFAS03 1.54 Gonadotropin B chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor binding
    		•  3.82869520790782 bayes_pls_golite062009
  • growth factor activity
    		•  3.62221742459173 bayes_pls_golite062009
  • cytokine activity
    		•  3.17846996740251 bayes_pls_golite062009
  • binding
    		•  3.15354794888407 bayes_pls_golite062009
  • protein binding
    		•  2.1792666055068 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.75705779600551 bayes_pls_golite062009
  • cell surface binding
    		•  1.64295809813608 bayes_pls_golite062009
  • vascular endothelial growth factor receptor binding
    		•  1.60164719227409 bayes_pls_golite062009
  • vascular endothelial growth factor receptor 2 binding
    		•  1.54571273907369 bayes_pls_golite062009
  • heparin binding
    		•  1.49178462532916 bayes_pls_golite062009
  • platelet-derived growth factor receptor binding
    		•  1.24923143969832 bayes_pls_golite062009
  • receptor serine/threonine kinase binding
    		•  1.23697909456831 bayes_pls_golite062009
  • transforming growth factor beta receptor binding
    		•  1.11404326825305 bayes_pls_golite062009
  • transmembrane receptor protein serine/threonine kinase binding
    		•  1.11404326825305 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.08192174862697 bayes_pls_golite062009
  • pattern binding
    		•  0.887560257049781 bayes_pls_golite062009
  • growth factor binding
    		•  0.678268907445851 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.599417707067598 bayes_pls_golite062009
  • hormone activity
    		•  0.573787538297963 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.543884186019388 bayes_pls_golite062009
  • type II transforming growth factor beta receptor binding
    		•  0.506668686205984 bayes_pls_golite062009
  • vascular endothelial growth factor receptor 1 binding
    		•  0.49671267965057 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.121354612226311 bayes_pls_golite062009
  • protein homodimerization activity
    		•  0.111053773778833 bayes_pls_golite062009
  • identical protein binding
    		•  0.0150102964498082 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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