| Protein: | gi|149044345, gi... |
| Organism: | Rattus norvegicus |
| Length: | 131 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|149044345, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..1] | [131..1] |
|
|
197.0 | [0..1] | [131..1] |
|
|
197.0 | [0..1] | [131..1] |
|
|
192.0 | [0..1] | [131..1] |
|
|
192.0 | [0..1] | [131..1] |
|
|
182.0 | [0..1] | [131..1] |
|
|
132.0 | [0..33] | [130..44] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MRNHVLAASI SMLSLLAIMG DTDSKTDSSF LMDSQRCMRH HYVDSISHPL YKCSSKMVLL 60
61 ARCEGHCSQA SRSEPLVSFS TVLKQPFRSS CHCCRPQTSK LKALRLRCSG GMRLTATYRY 120
121 ILSCHCEECS S
|
| Detection Method: |  |
| Confidence: | 1.54 |
| Match: | 1hcnB |
| Description: | Gonadotropin B chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 3.82869520790782 | bayes_pls_golite062009 |
| growth factor activity | 3.62221742459173 | bayes_pls_golite062009 |
| cytokine activity | 3.17846996740251 | bayes_pls_golite062009 |
| binding | 3.15354794888407 | bayes_pls_golite062009 |
| protein binding | 2.1792666055068 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.75705779600551 | bayes_pls_golite062009 |
| cell surface binding | 1.64295809813608 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 1.60164719227409 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 1.54571273907369 | bayes_pls_golite062009 |
| heparin binding | 1.49178462532916 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.24923143969832 | bayes_pls_golite062009 |
| receptor serine/threonine kinase binding | 1.23697909456831 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 1.11404326825305 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 1.11404326825305 | bayes_pls_golite062009 |
| polysaccharide binding | 1.08192174862697 | bayes_pls_golite062009 |
| pattern binding | 0.887560257049781 | bayes_pls_golite062009 |
| growth factor binding | 0.678268907445851 | bayes_pls_golite062009 |
| protein dimerization activity | 0.599417707067598 | bayes_pls_golite062009 |
| hormone activity | 0.573787538297963 | bayes_pls_golite062009 |
| transcription regulator activity | 0.543884186019388 | bayes_pls_golite062009 |
| type II transforming growth factor beta receptor binding | 0.506668686205984 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 0.49671267965057 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.121354612226311 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.111053773778833 | bayes_pls_golite062009 |
| identical protein binding | 0.0150102964498082 | bayes_pls_golite062009 |
