Protein Overview: MYCD_RAT

General Information:
Name(s) found:	MYCD_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|39930539\|ref\|NP_872608.1\| transcription factor myocardin [Rattus norvegicus] [NCBI NR] gi\|32363206\|sp\|Q8R5I7.2\|MYCD_RAT RecName: Full=Myocardin [NCBI NR] gi\|32188244\|tpg\|DAA01467.1\| TPA_exp: myocardin [Rattus norvegicus] [NCBI NR] Myocardin OS=Rattus norvegicus GN=Myocd PE=1 SV=2 [Swiss-Prot] Ensembl_locations(Chr-bp):10-49126983 Myocardin [hmr_yeast5_DM3-1_pombe.fasta] transcription factor myocardin [HMR_022704-rand.fasta] TPA: myocardin; MYCD [Rattus norvegicus]gi\|39930539\|ref\|NP_872608.1\| transcription factor myocardin [Rattus norvegicus]gi\|32363206\|sp\|Q8R5I7\|MYCD_RAT Myocardin [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Myocardin [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Myocardin [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] transcription factor myocardin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] TPA_exp: myocardin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 MYOCARDIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Myocd Myocardin [rat-ipi-250309-contam.fasta] Myocardin OS=Rattus norvegicus GN=Myocd [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	938 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA]
Biological Process:	positive regulation of cell proliferation [UNKNOWN][IEA] regulation of histone acetylation [UNKNOWN][IEA] regulation of smooth muscle cell differentiation [IMP] positive regulation of transcription [UNKNOWN][IEA] vasculogenesis [UNKNOWN][IEA] regulation of cell growth by extracellular stimulus [UNKNOWN][IEA] positive regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA] regulation of transcription from RNA polymerase II promoter [UNKNOWN][IDA] positive regulation of smooth muscle contraction [UNKNOWN] negative regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA] heart development [UNKNOWN][IEA] smooth muscle cell differentiation [IMP] regulation of myoblast differentiation [UNKNOWN][IEA] muscle cell differentiation [UNKNOWN] positive regulation of gene-specific transcription from RNA polymerase II promoter [UNKNOWN]
Molecular Function:	nucleic acid binding [IEA] histone acetyltransferase binding [UNKNOWN][IEA] protein binding [UNKNOWN][IPI] protein homodimerization activity [IDA][IPI] transcription coactivator activity [UNKNOWN][IMP] histone deacetylase binding [UNKNOWN][IEA] protein heterodimerization activity [IPI] transcription factor binding [UNKNOWN] transcription activator activity [UNKNOWN][IMP]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLGSEHSL LIRRKFRSVL QLRLQQRRTQ EQLANQGLIP PLKSPTEFHD PRKKLDSAKT  60
   61 EDSLRRKVRN RSDRASLVNM HILQASTAER SIPTAQMKLK RARLADDLNE KIALRPGPLE 120
  121 LVEKNILPMD SSVKEAIKGT EVSLSKAADA FAFEDDSSRD GLSPDQARSE DPQGSGGSTP 180
  181 DIKSTEAPLA GPLDTIQDLT PGSESDKNDT ASQLSNQSDS GKQVLGPLST PIPVHTAVKS 240
  241 KSLGDSKNRH KKPKDPKPKV KKLKYHQYIP PDQKAEKSPP PMDSAYARLL QQQQLFLQLQ 300
  301 ILSQQQQQQQ QQQQQQQQQQ QQQRFSYPGM HQAHLKEPNE QMTRNPNSSS TPLNNTPLSP 360
  361 VKNSLSGQTG VSSLKPGPLP PNLDDLKVSE LRQQLRIRGL PVSGTKTALV DRLRPFQDCA 420
  421 GNPVPNFGDI TTVTFPVTPN TLPSYQSSPS GFYHFGSTSS SPPISPASSD LSAAGSLPDT 480
  481 FTDASPGFGL HASPVPACTD ESLLSSLNGG SGPSEPDGLD SEKDKMLVEK QKVINQLTWK 540
  541 LRQEQRQVEE LRMQLQKQKS GCNDQKPLPF LATTIKQEDV SSCPFAAQQA SGKGQGHSSD 600
  601 SPPPACETAQ LLPHCVESSG QTHVLSSTFL SPQCSPQHSP LGTLKSPQHI SLPPSPNNHY 660
  661 FLASSSGAQR ENHGVSSPNS SQGCAQMTGL QSSDKVGPTF SIPSPTFPKS SPTVPEITQP 720
  721 PSYEDAVKQQ MTRSQQMDEL LDVLIESGEM PADAREDHSC LQKIPKIPGS SCSPTTILPK 780
  781 SSASFEQASS GGQISFDHYA TDSEEHLEVL LNSHSPIGKV SDVTLLKIGS EEPPFDGIMD 840
  841 GFPGKAAEDL FSAHELLPGP LSPMHTQLSP PSVDSSGLQL SFTESPWETM EWLDLTPPSS 900
  901 TPGFSNLTSS GPSIFNIDFL DVTDLNLNSP MDLHLQQW

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: MYCD_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: